{ "description": "Publications coauthored by Cem Meydan", "page": "https://www.cemmeydan.com/publications/", "person": "https://www.cemmeydan.com/#cem-meydan", "count": 165, "items": [ { "key": "debek26", "year": 2026, "type": "article", "title": "SWI/SNF complexes shape 3D chromatin architecture through CTCF and cohesin", "venue": "Nature", "doi": "10.1038/s41586-026-11197-w", "authors": [ "Debek S", "Meydan C", "Chin CR", "Yu J", "Durmaz C", "Tsialta I", "Pelzer B", "Maurer C", "Ou A", "Laguillo-Diego A", "Scourzic L", "Tumuluru S", "Teater M", "Wu R", "Darsow B", "Rivas MA", "Marin-Rubio JL", "Stadtfeld M", "Apostolou E", "Mason CE", "Elenitoba-Johnson KSJ", "Risca VI", "Melnick A", "Barisic D" ], "consortium": null, "meydanRoles": [ "first author", "corresponding author" ], "sharedRoles": [ "first author", "corresponding author" ], "researchArea": "C", "topic": "Chromatin", "url": "https://www.cemmeydan.com/publications/#p-debek26" }, { "key": "pcresol26", "year": 2026, "type": "article", "title": "Systemic elevation of gut derived p-cresol during one year in space: implications for brain, heart, bone, liver and microbiome in astronauts", "venue": "Frontiers in Physiology", "doi": "10.3389/fphys.2026.1878680", "authors": [ "Schmidt MA", "Schmidt CM", "Schmidt JC", "Meydan C", "Afshin EE", "Overbey EG", "Kim J", "Singh RS", "Beheshti A", "Mason CE" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "S", "topic": "Twins Study", "url": "https://www.cemmeydan.com/publications/#p-pcresol26" }, { "key": "zhang26", "year": 2026, "type": "article", "title": "Targeting macrophage ferritin heavy chain mitigates ferroptosis and lung injury in experimental acute respiratory distress syndrome", "venue": "Nature Communications", "doi": "10.1038/s41467-026-74828-w", "authors": [ "Zhang WZ", "Kim K", "Bhatia D", "Faherty L", "Simmons W", "Kallinos E", "Carrasco SE", "Hoffman KL", "Houghton S", "Hsu CL", "Haber L", "Meydan C", "Mason CE", 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"Weist J", "Villagomez L", "La Ferlita A", "Gao C", "Hout I", "Leon S", "Brown-Burke F", "Pray B", "Harper M", "Bhagwat N", "Vaddi K", "Scherle PA", "Meydan C", "Chen-Kiang S", "DiLiberto M", "Elemento O", "Mason CE", "Paik J", "Alinari L", "Lapalombella R", "Sehgal L", "Baiocchi R" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Lymphoma", "url": "https://www.cemmeydan.com/publications/#p-prmt5abs26" }, { "key": "cebpd26", "year": 2026, "type": "article", "title": "CCAAT-enhancer binding protein delta functions as a tumor suppressor gene in acute myeloid leukemia", "venue": "Neoplasia", "doi": "10.1016/j.neo.2026.101293", "authors": [ "Prajapati SC", "Meydan C", "Neelamraju Y", "Wang Z", "Atwood G", "Paudel BB", "Fan H", "Dunham N", "Dillon R", "Gandara JA", "Lee T", "Sheridan C", "Wang S", "Zumbo P", "Becker MW", "Bullinger L", "Carroll MP", "D'Andrea RJ", "Levine RL", "Mason CE", "Melnick AM", "Zang C", "Bekiranov S", "Garrett-Bakelman FE" 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"key": "ferro26", "year": 2026, "type": "preprint", "title": "Targeted deletion of macrophage ferritin heavy chain protects from macrophage ferroptosis in acute respiratory distress syndrome", "venue": "Research Square", "doi": "10.21203/rs.3.rs-5276478/v1", "authors": [ "Zhang W", "Kim K", "Faherty L", "Simmons W", "Carrasco S", "Hoffman K", "Houghton S", "Hsu CL", "Haber L", "Goyal P", "Chung KP", "Ballman K", "Redmond D", "Mancias J", "Choi A", "Schenck E", "Plataki M", "Mason C", "Meydan C", "Cloonan S" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "I", "topic": null, "url": "https://www.cemmeydan.com/publications/#p-ferro26" }, { "key": "hfd26", "year": 2026, "type": "preprint", "title": "Diverse High-Fat Diets Drive Multi-Omic Reprogramming that Persists after Dietary Reversal", "venue": "SSRN", "doi": "10.2139/ssrn.6690547", "authors": [ "Van Camp AG", "Park J", "Ozcelik E", "Eskiocak O", "Ozler KA", "Papciak K", "Subhash S", "Alwaseem H", "Ergin 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[], "researchArea": "C", "topic": "Leukemia", "url": "https://www.cemmeydan.com/publications/#p-p53npm1_25" }, { "key": "lei25", "year": 2025, "type": "article", "title": "Global biogeography of airborne viruses in public transit systems and their host interactions", "venue": "Microbiome", "doi": "10.1186/s40168-025-02173-z", "authors": [ "Lei H", "Du S", "Tong X", "Chan WL", "Leung MHY", "Bøifot KO", "Bezdan D", "Butler DJ", "Danko DC", "Green DC", "Hernandez MT", "Kelly FJ", "Lucaci AG", "Meydan C", "Nieto-Caballero M", "Ryon K", "Tierney B", "Udekwu KI", "Young BG", "Mason CE", "Dybwad M", "Lee PKH" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "M", "topic": "MetaSUB", "url": "https://www.cemmeydan.com/publications/#p-lei25" }, { "key": "sox11_25", "year": 2025, "type": "article", "title": "The novel immunocompetent Eμ-SOX11CCND1 mouse model phenotypically and molecularly resembles human mantle cell lymphoma", "venue": "Clinical Cancer Research", "doi": "10.1158/1078-0432.CCR-25-0534", "authors": [ "Jafari H", "Brown-Burke F", "Pray B", "Sloan S", "Helmig-Mason J", "Hout I", "Leon S", "Long M", "Chan WK", "Hanel W", "Corps K", "Leshchenko VV", "Edwards D", "Prakash Shukla R", "Reci S", "Vaddi K", "Scherle P", "Collier P", "La Ferlita A", "Singh S", "Distefano R", "Lapalombella R", "Sehgal L", "Faryabi RB", "Meydan C", "Mason CE", "Baiocchi RA", "Parekh S", "Alinari L" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Lymphoma", "url": "https://www.cemmeydan.com/publications/#p-sox11_25" }, { "key": "lee25", "year": 2025, "type": "article", "title": "Genomic Analysis of Cardiovascular Diseases Utilizing Space Omics and Medical Atlas", "venue": "Genes", "doi": "10.3390/genes16090996", "authors": [ "Lee R", "Rayhun A", "Kim JK", "Meydan C", "Beheshti A", "Sporn K", "Kumar R", "Calixte J", "McNerney MW", "Shah J", "Waisberg E", "Ong J", "Mason C" ], "consortium": null, "meydanRoles": [], 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"title": "Proteomic, epigenomic, genomic, and immunological changes induced by spaceflights", "venue": "European Journal of Human Genetics", "doi": null, "authors": [ "Kim J", "Overbey E", "Hirschberg J", "Park J", "Ryon K", "Proszynski J", "Collier P", "Meydan C", "Plummer J", "Martelotto L", "Zimmerman R", "Woo K", "Love W", "Beach A", "Vlaminck I", "Rosenberg M", "Mateus J", "Shirah B", "Jahangir E", "Paul AL", "Ferl R", "Borg J", "Muratani M", "Matei I", "Lyden D", "Bailey S", "Mason C" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "S", "topic": null, "url": "https://www.cemmeydan.com/publications/#p-ejhg25" }, { "key": "lili25", "year": 2025, "type": "article", "title": "A multi-omic study profiles women with PCOS to reveal unique gut microbiome compositions", "venue": "Precision Clinical Medicine", "doi": "10.1093/pcmedi/pbaf012", "authors": [ "Lili L", "Kunces LJ", "Meydan C", "Pesce S", "Afshin EE", "Rickard N", "Stujenske TM", "D'Adamo CR", "Dudley JT", "Zhang B", "Mason CE" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "M", "topic": "Gut microbiome", "url": "https://www.cemmeydan.com/publications/#p-lili25" }, { "key": "sakamoto25", "year": 2025, "type": "article", "title": "Mutant IDH1 cooperates with NPM1c or FLT3ITD to drive distinct myeloid diseases and molecular outcomes", "venue": "Proceedings of the National Academy of Sciences", "doi": "10.1073/pnas.2415779122", "authors": [ "Sakamoto T", "Leca J", "Zhang X", "Meydan C", "Foox J", "Ramachandran P", "Hendrikse LD", "Zhou W", "Berger T", "Fortin J", "Chan SM", "Chiang MF", "Inoue S", "Li WY", "Chu MF", "Duncan GS", "Wakeham A", "Lemonnier F", "Tobin C", "Mcwilliam R", "Colonna I", "Bontoux C", "Jafari SM", "Bowman RL", "Nicolay B", "Ronseaux S", "Narayanaswamy R", "Levine RL", "Melnick AM", "Mason CE", "Minden MD", "Mak TW" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Leukemia", "url": "https://www.cemmeydan.com/publications/#p-sakamoto25" }, { "key": "isshiki25", "year": 2025, "type": "article", "title": "EZH2 inhibition enhances T cell immunotherapies by inducing lymphoma immunogenicity and improving T cell function", "venue": "Cancer Cell", "doi": "10.1016/j.ccell.2024.11.006", "authors": [ "Isshiki Y", "Chen X", "Teater M", "Karagiannidis I", "Nam H", "Cai W", "Meydan C", "Xia M", "Shen H", "Gutierrez J", "Easwar Kumar V", "Carrasco SE", "Ouseph MM", "Yamshon S", "Martin P", "Griess O", "Shema E", "Porazzi P", "Ruella M", "Brentjens RJ", "Inghirami G", "Zappasodi R", "Chadburn A", "Melnick AM", "Béguelin W" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Lymphoma", "url": "https://www.cemmeydan.com/publications/#p-isshiki25" }, { "key": "shirah25a", "year": 2025, "type": "chapter", "title": "Telomere length dynamics associated with short-duration human spaceflight", "venue": "Neuroscience Research in Short-Duration 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"Meydan C", "Najjar D", "Foox J", "Collier P", "Nelson TM", "Zhang DJ", "Iyoha NM", "Jones CJ", "Przywozny B", "Sibilly T", "Pandya S", "Gonzalez Y", "Persad AH", "Ahmed MM", "Bukhari H", "Naseer MI", "Sen J", "Klotz R", "Yu M", "Ashemimry MN", "Wolchok J", "Merghoub T", "Mason CE" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "S", "topic": "Inspiration4", "url": "https://www.cemmeydan.com/publications/#p-shirah25b" }, { "key": "mito2_25", "year": 2025, "type": "preprint", "title": "Guardians of the Mitochondria: Space Mitochondria 2.0 Systemic Analysis Reveals Bioenergetic Dysregulation Across Species", "venue": "SSRN", "doi": "10.2139/ssrn.5087025", "authors": [ "Guarnieri JW", "Maghsoudi Z", "Kim J", "Bya P", "Widjaja GA", "Barker R", "Burke M", "Cen Z", "Fazelinia H", "Tsoy S", "Tiersky R", "Peczak A", "Kim J", "Kim YA", "Haltom J", "Almeida M", "Garris MA", "Day S", "Sanchez-Hodge R", "Zilberman AH", "Allen NG", "Kukib AJ", "Blaber EA", "Mathyk B", 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"long24", "year": 2024, "type": "article", "title": "Resistance to PRMT5-targeted therapy in mantle cell lymphoma", "venue": "Blood Advances", "doi": "10.1182/bloodadvances.2023010554", "authors": [ "Long ME", "Koirala S", "Sloan S", "Brown-Burke F", "Weigel C", "Villagomez L", "Corps K", "Sharma A", "Hout I", "Harper M", "Helmig-Mason J", "Tallada S", "Chen Z", "Scherle P", "Vaddi K", "Chen-Kiang S", "Di Liberto M", "Meydan C", "Foox J", "Butler D", "Mason C", "Alinari L", "Blaser BW", "Baiocchi R" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Lymphoma", "url": "https://www.cemmeydan.com/publications/#p-long24" }, { "key": "cospar24", "year": 2024, "type": "abstract", "title": "Integrative multi-omic analysis of astronauts from NASA Twins, Inspiration4, Axiom-2, and Polaris Dawn missions", "venue": "45th COSPAR Scientific Assembly", "doi": null, "authors": [ "Kim J", "Mason C", "Overbey E", "Tierney B", "Meydan C", "Ryon K", "Najjar D", "Rosenberg M", "Mateus J" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "S", "topic": null, "url": "https://www.cemmeydan.com/publications/#p-cospar24" }, { "key": "ejhg24", "year": 2024, "type": "abstract", "title": "Comprehensive and Integrative Single Cell Multiomics Analysis of the Immune System of Private Mission Astronauts", "venue": "European Journal of Human Genetics", "doi": null, "authors": [ "Kim J", "Mason C", "Overbey E", "Tierney B", "Najjar D", "Ryon K", "Meydan C", "Mateus J", "Rosenberg M" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "S", "topic": null, "url": "https://www.cemmeydan.com/publications/#p-ejhg24" }, { "key": "soma24", "year": 2024, "type": "article", "title": "The Space Omics and Medical Atlas (SOMA) and international astronaut biobank", "venue": "Nature", "doi": "10.1038/s41586-024-07639-y", "authors": [ "Overbey EG", "Kim J", "Tierney BT", "Park J", "Houerbi N", "Lucaci AG", "Garcia Medina S", "Damle N", "Najjar D", "Grigorev K", "Afshin EE", "Ryon KA", "Sienkiewicz K", "Patras L", "Klotz R", "Ortiz V", "MacKay M", "Schweickart A", "Chin CR", "Sierra MA", "Valenzuela MF", "Dantas E", "Nelson TM", "Cekanaviciute E", "Deards G", "Foox J", "Narayanan SA", "Schmidt CM", "Schmidt MA", "Schmidt JC", "Mullane S", "Tigchelaar SS", "Levitte S", "Westover C", "Bhattacharya C", "Lucotti S", "Wain Hirschberg J", "Proszynski J", "Burke M", "Kleinman AS", "Butler DJ", "Loy C", "Mzava O", "Lenz J", "Paul D", "Mozsary C", "Sanders LM", "Taylor LE", "Patel CO", "Khan SA", "Suhail Mohamad M", "Byhaqui SGA", "Aslam B", "Gajadhar AS", "Williamson L", "Tandel P", "Yang Q", "Chu J", "Benz RW", "Siddiqui A", "Hornburg D", "Blease K", "Moreno J", "Boddicker A", "Zhao J", "Lajoie B", "Scott RT", "Gilbert RR", "Lai Polo SH", "Altomare A", "Kruglyak S", "Levy S", "Ariyapala I", "Beer J", "Zhang B", "Hudson BM", "Rininger A", "Church SE", "Beheshti A", "Church GM", "Smith SM", "Crucian BE", "Zwart SR", "Matei I", "Lyden DC", "Garrett-Bakelman F", "Krumsiek J", "Chen Q", "Miller D", "Shuga J", "Williams S", "Nemec C", "Trudel G", "Pelchat M", "Laneuville O", "De Vlaminck I", "Gross S", "Bolton KL", "Bailey SM", "Granstein R", "Furman D", "Melnick AM", "Costes SV", "Shirah B", "Yu M", "Menon AS", "Mateus J", "Meydan C", "Mason CE" ], "consortium": null, "meydanRoles": [ "corresponding author" ], "sharedRoles": [ "corresponding author" ], "researchArea": "S", "topic": "Inspiration4", "url": "https://www.cemmeydan.com/publications/#p-soma24" }, { "key": "jones24", "year": 2024, "type": "article", "title": "Molecular and physiological changes in the SpaceX Inspiration4 civilian crew", "venue": "Nature", "doi": "10.1038/s41586-024-07648-x", "authors": [ "Jones CW", "Overbey EG", "Lacombe J", "Ecker AJ", "Meydan C", "Ryon K", "Tierney B", "Damle N", "MacKay M", "Afshin EE", "Foox J", "Park J", "Nelson TM", "Suhail Mohamad M", "Byhaqui SGA", "Aslam B", "Tali UA", "Nisa L", "Menon PV", "Patel CO", "Khan SA", "Ebert DJ", "Everson A", "Schubert MC", "Ali NN", "Sarma MS", "Kim J", "Houerbi N", "Grigorev K", "Garcia Medina JS", "Summers AJ", "Gu J", "Altin JA", "Fattahi A", "Hirzallah MI", "Wu JH", "Stahn AC", "Beheshti A", "Klotz R", "Ortiz V", "Yu M", "Patras L", "Matei I", "Lyden D", "Melnick A", "Banerjee N", "Mullane S", "Kleinman AS", "Loesche M", "Menon AS", "Donoviel DB", "Urquieta E", "Mateus J", "Sargsyan AE", "Shelhamer M", "Zenhausern F", "Bershad EM", "Basner M", "Mason CE" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "S", "topic": "Inspiration4", "url": "https://www.cemmeydan.com/publications/#p-jones24" }, { "key": "mason24", "year": 2024, "type": "review", "title": "A second space age spanning omics, platforms and medicine across orbits", "venue": "Nature", "doi": "10.1038/s41586-024-07586-8", "authors": [ "Mason CE", "Green J", "Adamopoulos KI", "Afshin EE", "Baechle JJ", "Basner M", "Bailey SM", "Bielski L", "Borg J", "Borg J", "Broddrick JT", "Burke M", "Caicedo A", "Castañeda V", "Chatterjee S", "Chin CR", "Church G", "Costes SV", "De Vlaminck I", "Desai RI", "Dhir R", "Diaz JE", "Etlin SM", "Feinstein Z", "Furman D", "Garcia-Medina JS", "Garrett-Bakelman F", "Giacomello S", "Gupta A", "Hassanin A", "Houerbi N", "Irby I", "Javorsky E", "Jirak P", "Jones CW", "Kamal KY", "Kangas BD", "Karouia F", "Kim J", "Kim JH", "Kleinman AS", "Lam T", "Lawler JM", "Lee JA", "Limoli CL", "Lucaci A", "MacKay M", "McDonald JT", "Melnick AM", "Meydan C", "Mieczkowski J", "Muratani M", "Najjar D", "Othman MA", "Overbey EG", "Paar V", "Park J", "Paul AM", "Perdyan A", "Proszynski J", "Reynolds RJ", "Ronca AE", "Rubins K", "Ryon KA", "Sanders LM", "Glowe PS", "Shevde Y", "Schmidt MA", "Scott RT", "Shirah B", "Sienkiewicz K", "Sierra MA", "Siew K", "Theriot CA", "Tierney BT", "Venkateswaran K", "Hirschberg JW", "Walsh SB", "Walter C", "Winer DA", "Yu M", "Zea L", "Mateus J", "Beheshti A" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "S", "topic": "Inspiration4", "url": "https://www.cemmeydan.com/publications/#p-mason24" }, { "key": "kim24", "year": 2024, "type": "article", "title": "Single-cell multi-ome and immune profiles of the Inspiration4 crew reveal conserved, cell-type, and sex-specific responses to spaceflight", "venue": "Nature Communications", "doi": "10.1038/s41467-024-49211-2", "authors": [ "Kim J", "Tierney BT", "Overbey EG", "Dantas E", "Fuentealba M", "Park J", "Narayanan SA", "Wu F", "Najjar D", "Chin CR", "Meydan C", "Loy C", "Mathyk B", "Klotz R", "Ortiz V", "Nguyen K", "Ryon KA", "Damle N", "Houerbi N", "Patras LI", "Schanzer N", "Hutchinson GA", "Foox J", "Bhattacharya C", "Mackay M", "Afshin EE", "Hirschberg JW", "Kleinman AS", "Schmidt JC", "Schmidt CM", "Schmidt MA", "Beheshti A", "Matei I", "Lyden D", "Mullane S", "Asadi A", "Lenz JS", "Mzava O", "Yu M", "Ganesan S", "De Vlaminck I", "Melnick AM", "Barisic D", "Winer DA", "Zwart SR", "Crucian BE", "Smith SM", "Mateus J", "Furman D", "Mason CE" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "S", "topic": "Inspiration4", "url": "https://www.cemmeydan.com/publications/#p-kim24" }, { "key": "tierney24", "year": 2024, "type": "article", "title": "Longitudinal multi-omics analysis of host microbiome architecture and immune responses during short-term spaceflight", "venue": "Nature Microbiology", "doi": "10.1038/s41564-024-01635-8", "authors": [ "Tierney BT", "Kim J", "Overbey EG", "Ryon KA", "Foox J", "Sierra MA", "Bhattacharya C", "Damle N", "Najjar D", "Park J", "Garcia Medina JS", "Houerbi N", "Meydan C", "Wain Hirschberg J", "Qiu J", "Kleinman AS", "Al-Ghalith GA", "MacKay M", "Afshin EE", "Dhir R", "Borg J", "Gatt C", "Brereton N", "Readhead BP", "Beyaz S", "Venkateswaran KJ", "Wiseman K", "Moreno J", "Boddicker AM", "Zhao J", "Lajoie BR", "Scott RT", "Altomare A", "Kruglyak S", "Levy S", "Church GM", "Mason CE" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "S", "topic": "Inspiration4", "url": "https://www.cemmeydan.com/publications/#p-tierney24" }, { "key": "siew24", "year": 2024, "type": "article", "title": "Cosmic kidney disease: an integrated pan-omic, physiological and morphological study into spaceflight-induced renal dysfunction", "venue": "Nature Communications", "doi": "10.1038/s41467-024-49212-1", "authors": [ "Siew K", "Nestler KA", "Nelson C", "D’Ambrosio V", "Zhong C", "Li Z", "Grillo A", "Wan ER", "Patel V", "Overbey E", "Kim J", "Yun S", "Vaughan MB", "Cheshire C", "Cubitt L", "Broni-Tabi J", "Al-Jaber MY", "Boyko V", "Meydan C", "Barker P", "Arif S", "Afsari F", "Allen N", "Al-Maadheed M", "Altinok S", "Bah N", "Border S", "Brown AL", "Burling K", "Cheng-Campbell M", "Colón LM", "Degoricija L", "Figg N", "Finch R", "Foox J", "Faridi P", "French A", "Gebre S", "Gordon P", "Houerbi N", "Valipour Kahrood H", "Kiffer FC", "Klosinska AS", "Kubik A", "Lee HC", "Li Y", "Lucarelli N", "Marullo AL", "Matei I", "McCann CM", "Mimar S", "Naglah A", "Nicod J", "O’Shaughnessy KM", "Oliveira LCD", "Oswalt L", "Patras LI", "Lai Polo SH", "Rodríguez-Lopez M", "Roufosse C", "Sadeghi-Alavijeh O", "Sanchez-Hodge R", "Paul AS", "Schittenhelm RB", "Schweickart A", "Scott RT", "Choy Lim Kam Sian TC", "da Silveira WA", "Slawinski H", "Snell D", "Sosa J", "Saravia-Butler AM", "Tabetah M", "Tanuwidjaya E", "Walker-Samuel S", "Yang X", "Yasmin", "Zhang H", "Godovac-Zimmermann J", "Sarder P", "Sanders LM", "Costes SV", "Campbell RAA", "Karouia F", "Mohamed-Alis V", "Rodriques S", "Lynham S", "Steele JR", "Baranzini S", "Fazelinia H", "Dai Z", "Uruno A", "Shiba D", "Yamamoto M", "A.C.Almeida E", "Blaber E", "Schisler JC", "Eisch AJ", "Muratani M", "Zwart SR", "Smith SM", "Galazka JM", "Mason CE", "Beheshti A", "Walsh SB" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "S", "topic": "Kidney", "url": "https://www.cemmeydan.com/publications/#p-siew24" }, { "key": "wu24", "year": 2024, "type": "article", "title": "Single-cell analysis identifies conserved features of immune dysfunction in simulated microgravity and spaceflight", "venue": "Nature Communications", "doi": "10.1038/s41467-023-42013-y", "authors": [ "Wu F", "Du H", "Overbey E", "Kim J", "Makhijani P", "Martin N", "Lerner CA", "Nguyen K", "Baechle J", "Valentino TR", "Fuentealba M", "Bartleson JM", "Halaweh H", "Winer S", "Meydan C", "Garrett-Bakelman F", "Sayed N", "Melov S", "Muratani M", "Gerencser AA", "Kasler HG", "Beheshti A", "Mason CE", "Furman D", "Winer DA" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "S", "topic": "Immune", "url": "https://www.cemmeydan.com/publications/#p-wu24" }, { "key": "park24", "year": 2024, "type": "article", "title": "Spatial multi-omics of human skin reveals KRAS and inflammatory responses to spaceflight", "venue": "Nature Communications", "doi": "10.1038/s41467-024-48625-2", "authors": [ "Park J", "Overbey EG", "Narayanan SA", "Kim J", "Tierney BT", "Damle N", "Najjar D", "Ryon KA", "Proszynski J", "Kleinman A", "Hirschberg JW", "MacKay M", "Afshin EE", "Granstein R", "Gurvitch J", "Hudson BM", "Rininger A", "Mullane S", "Church SE", "Meydan C", "Church G", "Beheshti A", "Mateus J", "Mason CE" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "S", "topic": "Skin", "url": "https://www.cemmeydan.com/publications/#p-park24" }, { "key": "houerbi24", "year": 2024, "type": "article", "title": "Secretome profiling reveals acute changes in oxidative stress, brain homeostasis, and coagulation following short-duration spaceflight", "venue": "Nature Communications", "doi": "10.1038/s41467-024-48841-w", "authors": [ "Houerbi N", "Kim J", "Overbey EG", "Batra R", "Schweickart A", "Patras L", "Lucotti S", "Ryon KA", "Najjar D", "Meydan C", "Damle N", "Chin C", "Narayanan SA", "Guarnieri JW", "Widjaja G", "Beheshti A", "Tobias G", "Vatter F", "Hirschberg JW", "Kleinman A", "Afshin EE", "MacKay M", "Chen Q", "Miller D", "Gajadhar AS", "Williamson L", "Tandel P", "Yang Q", "Chu J", "Benz R", "Siddiqui A", "Hornburg D", "Gross S", "Shirah B", "Krumsiek J", "Mateus J", "Mao X", "Matei I", "Mason CE" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "S", "topic": "Inspiration4", "url": "https://www.cemmeydan.com/publications/#p-houerbi24" }, { "key": "alturki24", "year": 2024, "type": "article", "title": "Telomeric RNA (TERRA) increases in response to spaceflight and high-altitude climbing", "venue": "Communications Biology", "doi": "10.1038/s42003-024-06014-x", "authors": [ "Al-Turki TM", "Maranon DG", "Nelson CB", "Lewis AM", "Luxton JJ", "Taylor LE", "Altina N", "Wu F", "Du H", "Kim J", "Damle N", "Overbey E", "Meydan C", "Grigorev K", "Winer DA", "Furman D", "Mason CE", "Bailey SM" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "S", "topic": "Telomeres", "url": "https://www.cemmeydan.com/publications/#p-alturki24" }, { "key": "mcdonald24", "year": 2024, "type": "article", "title": "Space radiation damage rescued by inhibition of key spaceflight associated miRNAs", "venue": "Nature Communications", "doi": "10.1038/s41467-024-48920-y", "authors": [ "McDonald JT", "Kim J", "Farmerie L", "Johnson ML", "Trovao NS", "Arif S", "Siew K", "Tsoy S", "Bram Y", "Park J", "Overbey E", "Ryon K", "Haltom J", "Singh U", "Enguita FJ", "Zaksas V", "Guarnieri JW", "Topper M", "Wallace DC", "Meydan C", "Baylin S", "Meller R", "Muratani M", "Porterfield DM", "Kaufman B", "Mori MA", "Walsh SB", "Sigaudo-Roussel D", "Mebarek S", "Bottini M", "Marquette CA", "Wurtele ES", "Schwartz RE", "Galeano D", "Mason CE", "Grabham P", "Beheshti A" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "S", "topic": "Radiation", "url": "https://www.cemmeydan.com/publications/#p-mcdonald24" }, { "key": "cope24", "year": 2024, "type": "article", "title": "Transcriptomics analysis reveals molecular alterations underpinning spaceflight dermatology", "venue": "Communications Medicine", "doi": "10.1038/s43856-024-00532-9", "authors": [ "Cope H", "Elsborg J", "Demharter S", "McDonald JT", "Wernecke C", "Parthasarathy H", "Unadkat H", "Chatrathi M", "Claudio J", "Reinsch S", "Avci P", "Zwart SR", "Smith SM", "Heer M", "Muratani M", "Meydan C", "Overbey E", "Kim J", "Chin CR", "Park J", "Schisler JC", "Mason CE", "Szewczyk NJ", "Willis CRG", "Salam A", "Beheshti A" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "S", "topic": "Skin", "url": "https://www.cemmeydan.com/publications/#p-cope24" }, { "key": "camera24", "year": 2024, "type": "article", "title": "Aging and putative frailty biomarkers are altered by spaceflight", "venue": "Scientific Reports", "doi": "10.1038/s41598-024-57948-5", "authors": [ "Camera A", "Tabetah M", "Castañeda V", "Kim J", "Galsinh AS", "Haro-Vinueza A", "Salinas I", "Seylani A", "Arif S", "Das S", "Mori MA", "Carano A", "de Oliveira LC", "Muratani M", "Barker R", "Zaksas V", "Goel C", "Dimokidis E", "Taylor DM", "Jeong J", "Overbey E", "Meydan C", "Porterfield DM", "Díaz JE", "Caicedo A", "Schisler JC", "Laiakis EC", "Mason CE", "Kim MS", "Karouia F", "Szewczyk NJ", "Beheshti A" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "S", "topic": "Aging", "url": "https://www.cemmeydan.com/publications/#p-camera24" }, { "key": "borg24", "year": 2024, "type": "article", "title": "Spatiotemporal expression and control of haemoglobin in space", "venue": "Nature Communications", "doi": "10.1038/s41467-024-49289-8", "authors": [ "Borg J", "Loy C", "Kim J", "Buhagiar A", "Chin C", "Damle N", "De Vlaminck I", "Felice A", "Liu T", "Matei I", "Meydan C", "Muratani M", "Mzava O", "Overbey E", "Ryon KA", "Smith SM", "Tierney BT", "Trudel G", "Zwart SR", "Beheshti A", "Mason CE", "Borg J" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "S", "topic": "Hemoglobin", "url": "https://www.cemmeydan.com/publications/#p-borg24" }, { "key": "li24", "year": 2024, "type": "article", "title": "Loss of CREBBP and KMT2D cooperate to accelerate lymphomagenesis and shape the lymphoma immune microenvironment", "venue": "Nature Communications", "doi": "10.1038/s41467-024-47012-1", "authors": [ "Li J", "Chin CR", "Ying HY", "Meydan C", "Teater MR", "Xia M", "Farinha P", "Takata K", "Chu CS", "Jiang Y", "Eagles J", "Passerini V", "Tang Z", "Rivas MA", "Weigert O", "Pugh TJ", "Chadburn A", "Steidl C", "Scott DW", "Roeder RG", "Mason CE", "Zappasodi R", "Béguelin W", "Melnick AM" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Lymphoma", "url": "https://www.cemmeydan.com/publications/#p-li24" }, { "key": "barisic24", "year": 2024, "type": "article", "title": "ARID1A orchestrates SWI/SNF-mediated sequential binding of transcription factors with ARID1A loss driving pre-memory B cell fate and lymphomagenesis", "venue": "Cancer Cell", "doi": "10.1016/j.ccell.2024.02.010", "authors": [ "Barisic D", "Chin CR", "Meydan C", "Teater M", "Tsialta I", "Mlynarczyk C", "Chadburn A", "Wang X", "Sarkozy M", "Xia M", "Carson SE", "Raggiri S", "Debek S", "Pelzer B", "Durmaz C", "Deng Q", "Lakra P", "Rivas M", "Steidl C", "Scott DW", "Weng AP", "Mason CE", "Green MR", "Melnick A" ], "consortium": null, "meydanRoles": [ "first author" ], "sharedRoles": [ "first author" ], "researchArea": "C", "topic": "Lymphoma", "url": "https://www.cemmeydan.com/publications/#p-barisic24" }, { "key": "deng24", "year": 2024, "type": "article", "title": "SMARCA4 is a haploinsufficient B cell lymphoma tumor suppressor that fine-tunes centrocyte cell fate decisions", "venue": "Cancer Cell", "doi": "10.1016/j.ccell.2024.02.011", "authors": [ "Deng Q", "Lakra P", "Gou P", "Yang H", "Meydan C", "Teater M", "Chin C", "Zhang W", "Dinh T", "Hussein U", "Li X", "Rojas E", "Liu W", "Reville PK", "Kizhakeyil A", "Barisic D", "Parsons S", "Wilson A", "Henderson J", "Scull B", "Gurumurthy C", "Vega F", "Chadburn A", "Cuglievan B", "El-Mallawany NK", "Allen C", "Mason C", "Melnick A", "Green MR" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Lymphoma", "url": "https://www.cemmeydan.com/publications/#p-deng24" }, { "key": "arid1aabs24", "year": 2024, "type": "abstract", "title": "ARID1A mutations shape memory B-cell dynamics and confer sensitivity to SWI/SNF remodeling complex inhibition in lymphoma", "venue": "Blood Cancer Discovery", "doi": "10.1158/2643-3249.bcdsymp24-p11", "authors": [ "Barisic D", "Chin CR", "Meydan C", "Teater M", "Tsialta I", "Mlynarczyk C", "Steidl C", "Scott DW", "Weng AP", "Green MR", "Melnick A" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Lymphoma", "url": "https://www.cemmeydan.com/publications/#p-arid1aabs24" }, { "key": "lili24", "year": 2024, "type": "article", "title": "The importance of personalization in high altitude protocols for hematologic and metabolic benefits in sports: A multi-dimensional N-of-1 case study", "venue": "Heliyon", "doi": "10.1016/j.heliyon.2023.e23159", "authors": [ "Lili L", "Meydan C", "Rickard N", "Zhang B" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "X", "topic": null, "url": "https://www.cemmeydan.com/publications/#p-lili24" }, { "key": "swisnfabs23", "year": 2023, "type": "abstract", "title": "SWI/SNF Chromatin Remodeling Complex Orchestrates Sequential Binding of Key Transcription Factors in B Cells and Restricts Aggressive Lymphoma", "venue": "Blood", "doi": "10.1182/blood-2023-190494", "authors": [ "Barisic D", "Chin C", "Meydan C", "Teater M", "Tsialta I", "Mlynarczyk C", "Chadburn A", "Xia M", "Steidl C", "Scott DW", "P. 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"https://www.cemmeydan.com/publications/#p-virome23" }, { "key": "sloan23", "year": 2023, "type": "article", "title": "PRMT5 supports multiple oncogenic pathways in mantle cell lymphoma", "venue": "Blood", "doi": "10.1182/blood.2022019419", "authors": [ "Sloan SL", "Brown F", "Long M", "Weigel C", "Koirala S", "Chung JH", "Pray B", "Villagomez L", "Hinterschied C", "Sircar A", "Helmig-Mason J", "Prouty A", "Brooks E", "Youssef Y", "Hanel W", "Parekh S", "Chan WK", "Chen Z", "Lapalombella R", "Sehgal L", "Vaddi K", "Scherle P", "Chen-Kiang S", "Di Liberto M", "Elemento O", "Meydan C", "Foox J", "Butler D", "Mason CE", "Baiocchi RA", "Alinari L" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Lymphoma", "url": "https://www.cemmeydan.com/publications/#p-sloan23" }, { "key": "guarnieri23", "year": 2023, "type": "article", "title": "Core mitochondrial genes are down-regulated during SARS-CoV-2 infection of rodent and human hosts", "venue": "Science Translational Medicine", "doi": "10.1126/scitranslmed.abq1533", "authors": [ "Guarnieri JW", "Dybas JM", "Fazelinia H", "Kim MS", "Frere J", "Zhang Y", "Soto Albrecht Y", "Murdock DG", "Angelin A", "Singh LN", "Weiss SL", "Best SM", "Lott MT", "Zhang S", "Cope H", "Zaksas V", "Saravia-Butler A", "Meydan C", "Foox J", "Mozsary C", "Bram Y", "Kidane Y", "Priebe W", "Emmett MR", "Meller R", "Demharter S", "Stentoft-Hansen V", "Salvatore M", "Galeano D", "Enguita FJ", "Grabham P", "Trovao NS", "Singh U", "Haltom J", "Heise MT", "Moorman NJ", "Baxter VK", "Madden EA", "Taft-Benz SA", "Anderson EJ", "Sanders WA", "Dickmander RJ", "Baylin SB", "Wurtele ES", "Moraes-Vieira PM", "Taylor D", "Mason CE", "Schisler JC", "Schwartz RE", "Beheshti A", "Wallace DC" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "I", "topic": "COVID-19", "url": "https://www.cemmeydan.com/publications/#p-guarnieri23" }, { "key": "venturutti23", "year": 2023, "type": "article", "title": "An aged/autoimmune B-cell program defines the early transformation of extranodal lymphomas", "venue": "Cancer Discovery", "doi": "10.1158/2159-8290.CD-22-0561", "authors": [ "Venturutti L", "Rivas MA", "Pelzer BW", "Flümann R", "Hansen J", "Karagiannidis I", "Xia M", "McNally DR", "Isshiki Y", "Lytle A", "Teater M", "Chin CR", "Meydan C", "Knittel G", "Ricker E", "Mason CE", "Ye X", "Pan-Hammarström Q", "Steidl C", "Scott DW", "Reinhardt HC", "Pernis AB", "Béguelin W", "Melnick AM" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Lymphoma", "url": "https://www.cemmeydan.com/publications/#p-venturutti23" }, { "key": "kawabata23abs", "year": 2023, "type": "abstract", "title": "Developing next-generation drug sensitivity screening using primary tumor specimens", "venue": "Experimental Hematology", "doi": null, "authors": [ "Kawabata K", "Wouters B", "Meydan C", "Melnick A", "Nannya Y", "Takahashi S" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Leukemia", "url": "https://www.cemmeydan.com/publications/#p-kawabata23abs" }, { "key": "fortin23abs", "year": 2023, "type": "abstract", "title": "Abstract A16: Multi-omic analyses in genetically engineered mice reveal distinct and overlapping effects of leukemogenic Idh and Tet2 mutations", "venue": "Blood Cancer Discovery", "doi": null, "authors": [ "Fortin J", "Chiang MF", "Meydan C", "Foox J", "Ramachandran P", "Leca J", "Lemonnier F", "Li W", "Gams M", "Sakamoto T", "Chu M", "Tobin C", "Laugesen E", "Robinson T", "You-Ten A", "Butler D", "Berger T", "Minden M", "Levine R", "Guidos C", "Melnick A", "Mason C", "Mak T" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Leukemia", "url": "https://www.cemmeydan.com/publications/#p-fortin23abs" }, { "key": "cekan23abs", "year": 2023, "type": "abstract", "title": "Genomic and phenotypic predictors of human ex vivo sensitivity to simulated deep space radiation", "venue": "NASA Human Research Program Investigators Workshop", "doi": null, "authors": [ "Cekanaviciute E", "Pasternak C", "Sanders L", "Meydan C", "Foox J", "Verma S", "Pariset E", "Juran C", "Boyko V", "Malkani S", "Lopez-Macha A", "Lima I", "Mason C", "Costes S" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "S", "topic": "Radiation", "url": "https://www.cemmeydan.com/publications/#p-cekan23abs" }, { "key": "wang23abs", "year": 2023, "type": "abstract", "title": "Gene expression profiles reveal distinct regulatory activities of transcription factors GATA1 and TAL1 upon AML relapse", "venue": "Cancer Research", "doi": "10.1158/1538-7445.am2023-3155", "authors": [ "Wang Z", "Neelamraju Y", "Meydan C", "Dunham N", "Gandara J", "Lee T", "Prajapati S", "Rapaport F", "Sheridan C", "Zumbo P", "Becker M", "Bullinger L", "Carroll M", "D’Andrea R", "Dillon R", "Levine R", "Mason CE", "Melnick A", "Neuberg D", "Bekiranov S", "Zang C", "Garrett-Bakelman FE" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Leukemia", "url": "https://www.cemmeydan.com/publications/#p-wang23abs" }, { "key": "cope23pre", "year": 2023, "type": "preprint", "title": "More than a feeling: dermatological changes impacted by spaceflight", "venue": "Research Square", "doi": "10.21203/rs.3.rs-2367727/v1", "authors": [ "Cope H", "Elsborg J", "Demharter S", "Mcdonald JT", "Wernecke C", "Parthasarathy H", "Unadkat H", "Chatrathi M", "Claudio J", "Reinsch S", "Zwart S", "Smith S", "Heer M", "Muratani M", "Meydan C", "Overbey E", "Kim J", "Park J", "Schisler J", "Mason C", "Szewczyk N", "Willis C", "Salam A", "Beheshti A" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "S", "topic": "Skin", "url": "https://www.cemmeydan.com/publications/#p-cope23pre" }, { "key": "leca23", "year": 2023, "type": "article", "title": "IDH2 and TET2 mutations synergize to modulate T Follicular Helper cell functional interaction with the AITL microenvironment", "venue": "Cancer Cell", "doi": "10.1016/j.ccell.2023.01.003", "authors": [ "Leca J", "Lemonnier F", "Meydan C", "Foox J", "El Ghamrasni S", "Mboumba DL", "Duncan GS", "Fortin J", "Sakamoto T", "Tobin C", "Hodgson K", "Haight J", "Smith LK", "Elia AJ", "Butler D", "Berger T", "de Leval L", "Mason CE", "Melnick A", "Gaulard P", "Mak TW" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Lymphoma", "url": "https://www.cemmeydan.com/publications/#p-leca23" }, { "key": "fortin23", "year": 2023, "type": "article", "title": "Distinct and opposite effects of leukemogenic Idh and Tet2 mutations in hematopoietic stem and progenitor cells", "venue": "Proceedings of the National Academy of Sciences", "doi": "10.1073/pnas.2208176120", "authors": [ "Fortin J", "Chiang MF", "Meydan C", "Foox J", "Ramachandran P", "Leca J", "Lemonnier F", "Li WY", "Gams MS", "Sakamoto T", "Chu M", "Tobin C", "Laugesen 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"sharedRoles": [], "researchArea": "C", "topic": "Lymphoma", "url": "https://www.cemmeydan.com/publications/#p-xia22" }, { "key": "long22abs", "year": 2022, "type": "abstract", "title": "Acquired Resistance to PRMT5 Inhibition in Mantle Cell Lymphoma Is Associated with Compensatory Pathway Activation", "venue": "Blood", "doi": null, "authors": [ "Long M", "Koirala S", "Sloan S", "Brown F", "Tallada S", "Hinterschied C", "Corps K", "Helmig-Mason J", "Chung J", "Scherle P", "Vaddi K", "Meydan C", "Foox J", "Butler D", "Mason C", "Alinari L", "Blaser B", "Baiocchi R" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Lymphoma", "url": "https://www.cemmeydan.com/publications/#p-long22abs" }, { "key": "pasion22abs", "year": 2022, "type": "abstract", "title": "Epigenetic control of tumor cell killing by natural killer cells", "venue": "Cancer Research", "doi": "10.1158/1538-7445.am2022-3731", "authors": [ "Pasion J", "Barisic D", "Meydan C", "Ng KY", "Lafoz MT", "Huse M", "Melnick A", "Wendel HG" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Lymphoma", "url": "https://www.cemmeydan.com/publications/#p-pasion22abs" }, { "key": "wipe22", "year": 2022, "type": "article", "title": "A Wipe-Based Stool Collection and Preservation Kit for Microbiome Community Profiling", "venue": "Frontiers in Immunology", "doi": "10.3389/fimmu.2022.889702", "authors": [ "Hua H", "Meydan C", "Afshin EE", "Lili LN", "D’Adamo CR", "Rickard N", "Dudley JT", "Price ND", "Zhang B", "Mason CE" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "M", "topic": "Gut microbiome", "url": "https://www.cemmeydan.com/publications/#p-wipe22" }, { "key": "leung22", "year": 2022, "type": "article", "title": "SETD2 haploinsufficiency enhances germinal center-associated AICDA somatic hypermutation to drive B cell lymphomagenesis", "venue": "Cancer Discovery", "doi": "10.1158/2159-8290.CD-21-1514", "authors": [ "Leung W", "Teater M", "Durmaz C", "Meydan C", "Chivu AG", "Chadburn A", "Rice EJ", "Muley A", "Camarillo JM", "Arivalagan J", "Li Z", "Flowers CR", "Kelleher NL", "Danko CG", "Imielinski M", "Dave SS", "Armstrong SA", "Mason CE", "Melnick AM" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Lymphoma", "url": "https://www.cemmeydan.com/publications/#p-leung22" }, { "key": "barreyro22", "year": 2022, "type": "article", "title": "Blocking UBE2N abrogates oncogenic immune signaling in acute myeloid leukemia", "venue": "Science Translational Medicine", "doi": "10.1126/scitranslmed.abb7695", "authors": [ "Barreyro L", "Sampson AM", "Ishikawa C", "Hueneman KM", "Choi K", "Pujato MA", "Chutipongtanate S", "Wyder M", "Haffey WD", "O’Brien E", "Wunderlich M", "Ramesh V", "Kolb EM", "Meydan C", "Neelamraju Y", "Bolanos LC", "Christie S", "Smith MA", "Niederkorn M", "Muto T", "Kesari S", "Garrett-Bakelman FE", "Bartholdy B", "Will B", "Weirauch MT", "Mulloy JC", "Gul Z", "Medlin S", "Kovall RA", "Melnick AM", "Perentesis JP", "Greis KD", "Nurmemmedov E", "Seibel WL", "Starczynowski DT" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Leukemia", "url": "https://www.cemmeydan.com/publications/#p-barreyro22" }, { "key": "karlebach22", "year": 2022, "type": "article", "title": "Betacoronavirus-specific alternate splicing", "venue": "Genomics", "doi": "10.1016/j.ygeno.2022.110270", "authors": [ "Karlebach G", "Aronow B", "Baylin SB", "Butler D", "Foox J", "Levy S", "Meydan C", "Mozsary C", "Saravia-Butler AM", "Taylor DM", "Wurtele E", "Mason CE", "Beheshti A", "Robinson PN" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "I", "topic": "COVID-19", "url": "https://www.cemmeydan.com/publications/#p-karlebach22" }, { "key": "park22", "year": 2022, "type": "article", "title": "System-wide transcriptome damage and tissue identity loss in COVID-19 patients", "venue": "Cell Reports Medicine", "doi": "10.1016/j.xcrm.2022.100522", "authors": [ "Park J", "Foox J", "Hether T", "Danko DC", "Warren S", "Kim Y", "Reeves J", "Butler DJ", "Mozsary C", "Rosiene J", "Shaiber A", "Afshin EE", "MacKay M", "Rendeiro AF", "Bram Y", "Chandar V", "Geiger H", "Craney A", "Velu P", "Melnick AM", "Hajirasouliha I", "Beheshti A", "Taylor D", "Saravia-Butler A", "Singh U", "Wurtele ES", "Schisler J", "Fennessey S", "Corvelo A", "Zody MC", "Germer S", "Salvatore S", "Levy S", "Wu S", "Tatonetti NP", "Shapira S", "Salvatore M", "Westblade LF", "Cushing M", "Rennert H", "Kriegel AJ", "Elemento O", "Imielinski M", "Rice CM", "Borczuk AC", "Meydan C", "Schwartz RE", "Mason CE" ], "consortium": null, "meydanRoles": [ "corresponding author" ], "sharedRoles": [ "corresponding author" ], "researchArea": "I", "topic": "COVID-19", "url": "https://www.cemmeydan.com/publications/#p-park22" }, { "key": "amundarain22", "year": 2022, "type": "article", "title": "Landscape and clinical significance of long noncoding RNAs involved in multiple myeloma expressed fusion transcripts", "venue": "American Journal of Hematology", "doi": "10.1002/ajh.26450", "authors": [ "Amundarain A", "Valcárcel LV", "Ordoñez R", "Garate L", "Miranda E", "Cendoya X", "Carrasco‐Leon A", "Calasanz MJ", "Paiva B", "Meydan C", "Mason CE", "Melnick A", "Rodriguez‐Otero P", "Martín‐Subero JI", "San Miguel J", "Planes FJ", "Prósper F", "Agirre X" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Myeloma", "url": "https://www.cemmeydan.com/publications/#p-amundarain22" }, { "key": "sloan21abs", "year": 2021, "type": "abstract", "title": "PRMT5 inhibition modulates E2F1 and P53 to restore cell cycle regulation and drive DNA damage response in ibrutinib-resistant mantle cell lymphoma", "venue": "Blood", "doi": "10.1182/blood-2021-153992", "authors": [ "Sloan S", "Brown F", "Long M", "Helmig-Mason J", "Beck S", "Chung JH", "Hanel W", "Brooks E", "Klimazewski H", "Meydan C", "Foox J", "Butler D", "Byrd JC", "Lapalombella R", "Di Liberto M", "Mason C", "Chen-Kiang S", "Vaddi K", "Scherle P", "Baiocchi R", "Alinari L" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Lymphoma", "url": "https://www.cemmeydan.com/publications/#p-sloan21abs" }, { "key": "mcdonald21", "year": 2021, "type": "article", "title": "Role of miR-2392 in driving SARS-CoV-2 infection", "venue": "Cell Reports", "doi": "10.1016/j.celrep.2021.109839", "authors": [ "McDonald JT", "Enguita FJ", "Taylor D", "Griffin RJ", "Priebe W", "Emmett MR", "Sajadi MM", "Harris AD", "Clement J", "Dybas JM", "Aykin-Burns N", "Guarnieri JW", "Singh LN", "Grabham P", "Baylin SB", "Yousey A", "Pearson AN", "Corry PM", "Saravia-Butler A", "Aunins TR", "Sharma S", "Nagpal P", "Meydan C", "Foox J", "Mozsary C", "Cerqueira B", "Zaksas V", "Singh U", "Wurtele ES", "Costes SV", "Davanzo GG", "Galeano D", "Paccanaro A", "Meinig SL", "Hagan RS", "Bowman NM", "Wallet SM", "Maile R", "Wolfgang MC", "Hagan RS", "Mock JR", "Bowman NM", "Torres-Castillo JL", "Love MK", "Meinig SL", "Lovell W", "Rice C", "Mitchem O", "Burgess D", "Suggs J", "Jacobs J", "Wolfgang MC", "Altinok S", "Sapoval N", "Treangen TJ", "Moraes-Vieira PM", "Vanderburg C", "Wallace DC", "Schisler JC", "Mason CE", "Chatterjee A", "Meller R", "Beheshti A" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "I", "topic": "COVID-19", "url": "https://www.cemmeydan.com/publications/#p-mcdonald21" }, { "key": "foox21", "year": 2021, "type": "article", "title": "Epigenetic Forensics for Suspect Identification and Age Prediction", "venue": "Forensic Genomics", "doi": "10.1089/forensic.2021.0005", "authors": [ "Foox J", "Bezdan D", "Vijay P", "Getz K", "Ratanachai K", "Davis JW", "Booher K", "Yang X", "Meydan C", "Mason CE" ], "consortium": null, "meydanRoles": [ "corresponding author" ], "sharedRoles": [ "corresponding author" ], "researchArea": "X", "topic": "Forensics", "url": "https://www.cemmeydan.com/publications/#p-foox21" }, { "key": "grigorev21", "year": 2021, "type": "article", "title": "Haplotype diversity and sequence heterogeneity of human telomeres", "venue": "Genome Research", "doi": "10.1101/gr.274639.120", "authors": [ "Grigorev K", "Foox J", "Bezdan D", "Butler D", "Luxton JJ", "Reed J", "McKenna MJ", "Taylor L", "George KA", "Meydan C", "Bailey SM", "Mason CE" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "X", "topic": "Telomeres", "url": "https://www.cemmeydan.com/publications/#p-grigorev21" }, { "key": "danko21", "year": 2021, "type": "article", "title": "Global Genetic Cartography of Urban Metagenomes and Anti-Microbial Resistance", "venue": "Cell", "doi": "10.1016/j.cell.2021.05.002", "authors": [ "Danko D", "Bezdan D", "Afshin EE", "Ahsanuddin S", "Bhattacharya C", "Butler DJ", "Chng KR", "Donnellan D", "Hecht J", "Jackson K", "Kuchin K", "Karasikov M", "Lyons A", "Mak L", "Meleshko D", "Mustafa H", "Mutai B", "Neches RY", "Ng A", "Nikolayeva O", "Nikolayeva T", "Png E", "Ryon KA", "Sanchez JL", "Shaaban H", "Sierra MA", "Thomas D", "Young B", "Abudayyeh OO", "Alicea J", "Bhattacharyya M", "Blekhman R", "Castro-Nallar E", "Cañas AM", "Chatziefthimiou AD", "Crawford RW", "De Filippis F", "Deng Y", "Desnues C", "Dias-Neto E", "Dybwad M", "Elhaik E", "Ercolini D", "Frolova A", "Gankin D", "Gootenberg JS", "Graf AB", "Green DC", "Hajirasouliha I", "Hastings JJA", "Hernandez M", "Iraola G", "Jang S", "Kahles A", "Kelly FJ", "Knights K", "Kyrpides NC", "Łabaj PP", "Lee PKH", "Leung MHY", "Ljungdahl PO", "Mason-Buck G", "McGrath K", "Meydan C", "Mongodin EF", "Moraes MO", "Nagarajan N", "Nieto-Caballero M", "Noushmehr H", "Oliveira M", "Ossowski S", "Osuolale OO", "Özcan O", "Paez-Espino D", "Rascovan N", "Richard H", "Rätsch G", "Schriml LM", "Semmler T", "Sezerman OU", "Shi L", "Shi T", "Siam R", "Song LH", "Suzuki H", "Court DS", "Tighe SW", "Tong X", "Udekwu KI", "Ugalde JA", "Valentine B", "Vassilev DI", "Vayndorf EM", "Velavan TP", "Wu J", "Zambrano MM", "Zhu J", "Zhu S", "Mason CE" ], "consortium": "The International MetaSUB Consortium", "meydanRoles": [], "sharedRoles": [], "researchArea": "M", "topic": "MetaSUB", "url": "https://www.cemmeydan.com/publications/#p-danko21" }, { "key": "rendeiro21", "year": 2021, "type": "article", "title": "The spatial landscape of lung pathology during COVID-19 progression", "venue": "Nature", "doi": "10.1038/s41586-021-03475-6", "authors": [ "Rendeiro AF", "Ravichandran H", "Bram Y", "Chandar V", "Kim J", "Meydan C", "Park J", "Foox J", "Hether T", "Warren S", "Kim Y", "Reeves J", "Salvatore S", "Mason CE", "Swanson EC", "Borczuk AC", "Elemento O", "Schwartz RE" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "I", "topic": "COVID-19", "url": "https://www.cemmeydan.com/publications/#p-rendeiro21" }, { "key": "butler21", "year": 2021, "type": "article", "title": "Shotgun Transcriptome, Isothermal, and Spatial Omics Profiling of SARS-CoV-2 Infection", "venue": "Nature Communications", "doi": "10.1038/s41467-021-21361-7", "authors": [ "Butler D", "Mozsary C", "Meydan C", "Foox J", "Rosiene J", "Shaiber A", "Danko D", "Afshinnekoo E", "MacKay M", "Sedlazeck FJ", "Ivanov NA", "Sierra M", "Pohle D", "Zietz M", "Gisladottir U", "Ramlall V", "Sholle ET", "Schenck EJ", "Westover CD", "Hassan C", "Ryon K", "Young B", "Bhattacharya C", "Ng DL", "Granados AC", "Santos YA", "Servellita V", "Federman S", "Ruggiero P", "Fungtammasan A", "Chin CS", "Pearson NM", "Langhorst BW", "Tanner NA", "Kim Y", "Reeves JW", "Hether TD", "Warren SE", "Bailey M", "Gawrys J", "Meleshko D", "Xu D", "Couto-Rodriguez M", "Nagy-Szakal D", "Barrows J", "Wells H", "O’Hara NB", "Rosenfeld JA", "Chen Y", "Steel PAD", "Shemesh AJ", "Xiang J", "Thierry-Mieg J", "Thierry-Mieg D", "Iftner A", "Bezdan D", "Sanchez E", "Campion TR", "Sipley J", "Cong L", "Craney A", "Velu P", "Melnick AM", "Shapira S", "Hajirasouliha I", "Borczuk A", "Iftner T", "Salvatore M", "Loda M", "Westblade LF", "Cushing M", "Wu S", "Levy S", "Chiu C", "Schwartz RE", "Tatonetti N", "Rennert H", "Imielinski M", "Mason CE" ], "consortium": null, "meydanRoles": [ "first author" ], "sharedRoles": [ "first author" ], "researchArea": "I", "topic": "COVID-19", "url": "https://www.cemmeydan.com/publications/#p-butler21" }, { "key": "park21pre", "year": 2021, "type": "preprint", "title": "Systemic Tissue and Cellular Disruption from SARS-CoV-2 Infection revealed in COVID-19 Autopsies and Spatial Omics Tissue Maps", "venue": "bioRxiv", "doi": "10.1101/2021.03.08.434433", "authors": [ "Park J", "Foox J", "Hether T", "Danko D", "Warren S", "Kim Y", "Reeves J", "Butler DJ", "Mozsary C", "Rosiene J", "Shaiber A", "Afshinnekoo E", "MacKay M", "Bram Y", "Chandar V", "Geiger H", "Craney A", "Velu P", "Melnick AM", "Hajirasouliha I", "Beheshti A", "Taylor D", "Saravia-Butler A", "Singh U", "Wurtele ES", "Schisler J", "Fennessey S", "Corvelo A", "Zody MC", "Germer S", "Salvatore S", "Levy S", "Wu S", "Tatonetti N", "Shapira S", "Salvatore M", "Loda M", "Westblade LF", "Cushing M", "Rennert H", "Kriegel AJ", "Elemento O", "Imielinski M", "Borczuk AC", "Meydan C", "Schwartz RE", "Mason CE" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "I", "topic": "COVID-19", "url": "https://www.cemmeydan.com/publications/#p-park21pre" }, { "key": "carrasco21", "year": 2021, "type": "article", "title": "Characterization of complete lncRNAs transcriptome reveals the functional and clinical impact of lncRNAs in multiple myeloma", "venue": "Leukemia", "doi": "10.1038/s41375-021-01147-y", "authors": [ "Carrasco-Leon A", "Ezponda T", "Meydan C", "Valcárcel LV", "Ordoñez R", "Kulis M", "Garate L", "Miranda E", "Segura V", "Guruceaga E", "Vilas-Zornoza A", "Alignani D", "Pascual M", "Amundarain A", "Castro-Labrador L", "Martín-Uriz PS", "El-Omri H", "Taha RY", "Calasanz MJ", "Planes FJ", "Paiva B", "Mason CE", "San Miguel JF", "Martin-Subero JI", "Melnick A", "Prosper F", "Agirre X" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Myeloma", "url": "https://www.cemmeydan.com/publications/#p-carrasco21" }, { "key": "ng21", "year": 2021, "type": "article", "title": "A diagnostic host response biosignature for COVID-19 from RNA profiling of nasal swabs and blood", "venue": "Science Advances", "doi": "10.1126/sciadv.abe5984", "authors": [ "Ng DL", "Granados AC", "Santos YA", "Servellita V", "Goldgof GM", "Meydan C", "Sotomayor-Gonzalez A", "Levine AG", "Balcerek J", "Han LM", "Akagi N", "Truong K", "Neumann NM", "Nguyen DN", "Bapat SP", "Cheng J", "Martin CSS", "Federman S", "Foox J", "Gopez A", "Li T", "Chan R", "Chu CS", "Wabl CA", "Gliwa AS", "Reyes K", "Pan CY", "Guevara H", "Wadford D", "Miller S", "Mason CE", "Chiu CY" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "I", "topic": "COVID-19", "url": "https://www.cemmeydan.com/publications/#p-ng21" }, { "key": "duy21", "year": 2021, "type": "article", "title": "Chemotherapy induces senescence-like resilient cells capable of initiating AML recurrence", "venue": "Cancer Discovery", "doi": "10.1158/2159-8290.cd-20-1375", "authors": [ "Duy C", "Li M", "Teater M", "Meydan C", "Garrett-Bakelman FE", "Lee TC", "Chin CR", "Durmaz C", "Kawabata KC", "Dhimolea E", "Mitsiades CS", "Doehner H", "D'Andrea RJ", "Becker MW", "Paietta EM", "Mason CE", "Carroll M", "Melnick AM" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Leukemia", "url": "https://www.cemmeydan.com/publications/#p-duy21" }, { "key": "rivas21", "year": 2021, "type": "article", "title": "Smc3 dosage regulates B cell transit through germinal centers and restricts their malignant transformation", "venue": "Nature Immunology", "doi": "10.1038/s41590-020-00827-8", "authors": [ "Rivas MA", "Meydan C", "Chin CR", "Challman MF", "Kim D", "Bhinder B", "Kloetgen A", "Viny AD", "Teater MR", "McNally DR", "Doane AS", "Béguelin W", "Fernández MTC", "Shen H", "Wang X", "Levine RL", "Chen Z", "Tsirigos A", "Elemento O", "Mason CE", "Melnick AM" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Lymphoma", "url": "https://www.cemmeydan.com/publications/#p-rivas21" }, { "key": "longcovid21", "year": 2021, "type": "preprint", "title": "A Molecular Basis of Long COVID-19", "venue": "SSRN", "doi": "10.2139/ssrn.3885245", "authors": [ "Frere JJ", "Serafini RA", "Pryce KD", "Golynker I", "Panis M", "Zimering J", "Horiuchi S", "Hoagland DA", "Moeller R", "Oishi K", "Ruiz A", "Borczuk A", "Chandar V", "Bram Y", "Park J", "Foox J", "Meydan C", "Mason CE", "Schwartz RE", "Zachariou V", "tenOever BR" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "I", "topic": "COVID-19", "url": "https://www.cemmeydan.com/publications/#p-longcovid21" }, { "key": "willcockson20", "year": 2020, "type": "article", "title": "H1 histones control the epigenetic landscape by local chromatin compaction", "venue": "Nature", "doi": "10.1038/s41586-020-3032-z", "authors": [ "Willcockson MA", "Healton SE", "Weiss CN", "Bartholdy BA", "Botbol Y", "Mishra LN", "Sidhwani DS", "Wilson TJ", "Pinto HB", "Maron MI", "Skalina KA", "Toro LN", "Zhao J", "Lee CH", "Hou H", "Yusufova N", "Meydan C", "Osunsade A", "David Y", "Cesarman E", "Melnick AM", "Sidoli S", "Garcia BA", "Edelmann W", "Macian F", "Skoultchi AI" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "X", "topic": "Chromatin", "url": "https://www.cemmeydan.com/publications/#p-willcockson20" }, { "key": "fleur20", "year": 2020, "type": "article", "title": "Evolution of the epigenetic landscape in childhood B acute lymphoblastic leukemia and its role in drug resistance", "venue": "Cancer Research", "doi": "10.1158/0008-5472.CAN-20-1145", "authors": [ "Saint Fleur-Lominy S", "Evensen NA", "Bhatla T", "Sethia G", "Narang S", "Choi JH", "Ma X", "Yang JJ", "Kelly S", "Raetz E", "Harvey RC", "Willman C", "Loh ML", "Hunger SP", "Brown PA", "Getz KM", "Meydan C", "Mason CE", "Tsirigos A", "Carroll WL" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Leukemia", "url": "https://www.cemmeydan.com/publications/#p-fleur20" }, { "key": "li20", "year": 2020, "type": "article", "title": "Somatic mutations drive specific but reversible epigenetic heterogeneity states in AML", "venue": "Cancer Discovery", "doi": "10.1158/2159-8290.CD-19-0897", "authors": [ "Li S", "Chen X", "Wang J", "Meydan C", "Glass JL", "Shih AH", "Delwel R", "Levine RL", "Mason CE", "Melnick AM" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Leukemia", "url": "https://www.cemmeydan.com/publications/#p-li20" }, { "key": "gertz20", "year": 2020, "type": "article", "title": "Multi-omic, single-cell, and biochemical profiles of astronauts guide pharmacological strategies for returning to gravity", "venue": "Cell Reports", "doi": "10.1016/j.celrep.2020.108429", "authors": [ "Gertz ML", "Chin CR", "Tomoiaga D", "MacKay M", "Chang C", "Butler D", "Afshinnekoo E", "Bezdan D", "Schmidt MA", "Mozsary C", "Melnick A", "Garrett-Bakelman F", "Crucian B", "Lee SMC", "Zwart SR", "Smith SM", "Meydan C", "Mason CE" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "S", "topic": "Countermeasures", "url": "https://www.cemmeydan.com/publications/#p-gertz20" }, { "key": "luxton20a", "year": 2020, "type": "article", "title": "Telomere Length Dynamics and DNA Damage Responses Associated with Long-Duration Spaceflight", "venue": "Cell Reports", "doi": "10.1016/j.celrep.2020.108457", "authors": [ "Luxton JJ", "McKenna MJ", "Lewis A", "Taylor LE", "George KA", "Dixit SM", "Moniz M", "Benegas W", "Mackay MJ", "Mozsary C", "Butler D", "Bezdan D", "Meydan C", "Crucian BE", "Zwart SR", "Smith SM", "Mason CE", "Bailey SM" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "S", "topic": "Telomeres", "url": "https://www.cemmeydan.com/publications/#p-luxton20a" }, { "key": "luxton20b", "year": 2020, "type": "article", "title": "Temporal Telomere and DNA Damage Responses in the Space Radiation Environment", "venue": "Cell Reports", "doi": "10.1016/j.celrep.2020.108435", "authors": [ "Luxton JJ", "McKenna MJ", "Taylor LE", "George KA", "Zwart SR", "Crucian BE", "Drel VR", "Garrett-Bakelman FE", "Mackay MJ", "Butler D", "Foox J", "Grigorev K", "Bezdan D", "Meydan C", "Smith SM", "Sharma K", "Mason CE", "Bailey SM" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "S", "topic": "Telomeres", "url": "https://www.cemmeydan.com/publications/#p-luxton20b" }, { "key": "trinchant20", "year": 2020, "type": "article", "title": "Clonal hematopoiesis before, during, and after human spaceflight", "venue": "Cell Reports", "doi": "10.1016/j.celrep.2020.108458", "authors": [ "Mencia-Trinchant N", "MacKay MJ", "Chin C", "Afshinnekoo E", "Foox J", "Meydan C", "Butler D", "Mozsary C", "Vernice NA", "Darby C", "Schatz MC", "Bailey SM", "Melnick AM", "Guzman ML", "Bolton K", "Braunstein LZ", "Garrett-Bakelman F", "Levine RL", "Hassane DC", "Mason CE" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "S", "topic": "Hematopoiesis", "url": "https://www.cemmeydan.com/publications/#p-trinchant20" }, { "key": "malkani20", "year": 2020, "type": "article", "title": "Circulating miRNA Spaceflight Signature Reveals Targets for Countermeasure Development", "venue": "Cell Reports", "doi": "10.1016/j.celrep.2020.108448", "authors": [ "Malkani S", "Chin CR", "Cekanaviciute E", "Mortreux M", "Okinula H", "Tarbier M", "Schreurs AS", "Shirazi-Fard Y", "Tahimic CGT", "Rodriguez DN", "Sexton BS", "Butler D", "Verma A", "Bezdan D", "Durmaz C", "MacKay M", "Melnick A", "Meydan C", "Li S", "Garrett-Bakelman F", "Fromm B", "Afshinnekoo E", "Langhorst BW", "Dimalanta ET", "Cheng-Campbell M", "Blaber E", "Schisler JC", "Vanderburg C", "Friedländer MR", "McDonald JT", "Costes SV", "Rutkove S", "Grabham P", "Mason CE", "Beheshti A" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "S", "topic": "Countermeasures", "url": "https://www.cemmeydan.com/publications/#p-malkani20" }, { "key": "bezdan20", "year": 2020, "type": "article", "title": "Cell-free DNA (cfDNA) and exosome profiling from a year-long human spaceflight reveals circulating biomarkers", "venue": "iScience", "doi": "10.1016/j.isci.2020.101844", "authors": [ "Bezdan D", "Grigorev K", "Meydan C", "Pelissier Vatter FA", "Cioffi M", "Rao V", "MacKay M", "Nakahira K", "Burnham P", "Afshinnekoo E", "Westover C", "Butler D", "Mozsary C", "Donahoe T", "Foox J", "Mishra T", "Lucotti S", "Rana BK", "Melnick AM", "Zhang H", "Matei I", "Kelsen D", "Yu K", "Lyden DC", "Taylor L", "Bailey SM", "Snyder MP", "Garrett-Bakelman FE", "Ossowski S", "De Vlaminck I", "Mason CE" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "S", "topic": "Twins Study", "url": "https://www.cemmeydan.com/publications/#p-bezdan20" }, { "key": "dsup20", "year": 2020, "type": "preprint", "title": "Multi-omics Analysis of Dsup Expressing Human Cells Reveals Open Chromatin Architectural Differences", "venue": "bioRxiv", "doi": "10.1101/2020.11.10.373571", "authors": [ "Westover C", "Najjar D", "Meydan C", "Grigorev K", "Veling MT", "Chang RL", "Chin C", "Butler D", "Afshin EE", "Silver PA", "Mason CE" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "S", "topic": "Radiation", "url": "https://www.cemmeydan.com/publications/#p-dsup20" }, { "key": "dasilveira20", "year": 2020, "type": "article", "title": "Comprehensive Multi-Omics Analysis Reveals Mitochondrial Stress as a Central Hub for Spaceflight Biological Impact", "venue": "Cell", "doi": "10.1016/j.cell.2020.11.002", "authors": [ "da Silveira WA", "Fazelinia H", "Rosenthal SB", "Laiakis EC", "Kim MS", "Meydan C", "Kidane Y", "Rathi KS", "Smith SM", "Stear B", "Ying Y", "Zhang Y", "Foox J", "Zanello S", "Crucian B", "Wang D", "Nugent A", "Costa HA", "Zwart SR", "Schrepfer S", "Elworth RAL", "Sapoval N", "Treangen T", "MacKay M", "Gokhale NS", "Horner SM", "Singh LN", "Wallace DC", "Willey JS", "Schisler JC", "Meller R", "McDonald JT", "Fisch KM", "Hardiman G", "Taylor D", "Mason CE", "Costes SV", "Beheshti A" ], "consortium": null, "meydanRoles": [ "first author" ], "sharedRoles": [ "first author" ], "researchArea": "S", "topic": "Mitochondria", "url": "https://www.cemmeydan.com/publications/#p-dasilveira20" }, { "key": "afshinnekoo20", "year": 2020, "type": "review", "title": "Fundamental Biological Features of Spaceflight: Advancing the Field to Enable Deep Space Exploration", "venue": "Cell", "doi": "10.1016/j.cell.2020.10.050", "authors": [ "Afshinnekoo E", "Scott RT", "MacKay MJ", "Pariset E", "Cekanaviciute E", "Barker R", "Gilroy S", "Hassane D", "Smith SM", "Zwart SR", "Nelman-Gonzalez M", "Crucian BE", "Ponomarev SA", "Orlov OI", "Shiba D", "Muratani M", "Yamamoto M", "Richards SE", "Vaishampayan PA", "Meydan C", "Foox J", "Myrrhe J", "Istasse E", "Singh N", "Venkateswaran K", "Keune JA", "Ray HE", "Basner M", "Miller J", "Vitaterna MH", "Taylor DM", "Wallace D", "Rubins K", "Bailey SM", "Grabham P", "Costes SV", "Mason CE", "Beheshti A" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "S", "topic": "Review", "url": "https://www.cemmeydan.com/publications/#p-afshinnekoo20" }, { "key": "ordonez20", "year": 2020, "type": "article", "title": "Chromatin activation as a unifying principle underlying pathogenic mechanisms in multiple myeloma", "venue": "Genome Research", "doi": "10.1101/gr.265520.120", "authors": [ "Ordoñez R", "Kulis M", "Russiñol N", "Chapaprieta V", "Carrasco-Leon A", "García-Torre B", "Charalampopoulou S", "Clot G", "Beekman R", "Meydan C", "Duran-Ferrer M", "Verdaguer-Dot N", "Vilarrasa-Blasi R", "Soler-Vila P", "Garate L", "Miranda E", "San José-Enériz E", "Rodriguez-Madoz JR", "Ezponda T", "Martínez-Turrilas R", "Vilas-Zornoza A", "Lara-Astiaso D", "Dupéré-Richer D", "Martens JHA", "El-Omri H", "Taha RY", "Calasanz MJ", "Paiva B", "San Miguel J", "Flicek P", "Gut I", "Melnick A", "Mitsiades CS", "Licht JD", "Campo E", "Stunnenberg HG", "Agirre X", "Prosper F", "Martin-Subero JI" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Myeloma", "url": "https://www.cemmeydan.com/publications/#p-ordonez20" }, { "key": "li20abs", "year": 2020, "type": "abstract", "title": "Chemotherapy induces a transient senescence-like state capable of initiating AML recurrence", "venue": "Cancer Research", "doi": "10.1158/1538-7445.am2020-651", "authors": [ "Li M", "Teater M", "Meydan C", "Garrett-Bakelman FE", "Chin C", "Carroll M", "Melnick A", "Duy C" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Leukemia", "url": "https://www.cemmeydan.com/publications/#p-li20abs" }, { "key": "ramlall20", "year": 2020, "type": "article", "title": "Immune complement and coagulation dysfunction in adverse outcomes of SARS-CoV-2 infection", "venue": "Nature Medicine", "doi": "10.1038/s41591-020-1021-2", "authors": [ "Ramlall V", "Thangaraj PM", "Meydan C", "Foox J", "Butler D", "Kim J", "May B", "De Freitas JK", "Glicksberg BS", "Mason CE", "Tatonetti NP", "Shapira SD" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "I", "topic": "COVID-19", "url": "https://www.cemmeydan.com/publications/#p-ramlall20" }, { "key": "vernice20", "year": 2020, "type": "review", "title": "Long term spaceflight and the cardiovascular system", "venue": "Precision Clinical Medicine", "doi": "10.1093/pcmedi/pbaa022", "authors": [ "Vernice NA", "Meydan C", "Afshinnekoo E", "Mason CE" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "S", "topic": "Cardiovascular", "url": "https://www.cemmeydan.com/publications/#p-vernice20" }, { "key": "bell20", "year": 2020, "type": "article", "title": "Transcriptional response modules characterise IL-1β and IL-6 activity in COVID-19", "venue": "iScience", "doi": "10.1016/j.isci.2020.101896", "authors": [ "Bell LCK", "Meydan C", "Kim J", "Foox J", "Butler D", "Mason CE", "Shapira SD", "Noursadeghi M", "Pollara G" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "I", "topic": "COVID-19", "url": "https://www.cemmeydan.com/publications/#p-bell20" }, { "key": "kawabata20", "year": 2020, "type": "article", "title": "BCL6 maintains survival and self-renewal of primary human acute myeloid leukemia cells", "venue": "Blood", "doi": "10.1182/blood.2019001745", "authors": [ "Kawabata KC", "Zong H", "Meydan C", "Wyman S", "Wouters BJ", "Sugita M", "Goswami S", "Albert M", "Yip W", "Roboz GJ", "Chen Z", "Delwel R", "Carroll M", "Mason CE", "Melnick A", "Guzman ML" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Leukemia", "url": "https://www.cemmeydan.com/publications/#p-kawabata20" }, { "key": "borczuk20", "year": 2020, "type": "abstract", "title": "Lung Injury Due to COVID-19 Relative to Influenza and Nonviral ARDS and Normal Controls", "venue": "Journal of Molecular Diagnostics", "doi": null, "authors": [ "Borczuk A", "Kim Y", "Hether T", "Meydan C", "Foox J", "Bram Y", "Salvatore S", "Bailey M", "Danaher P", "White A", "Reeves J", "Warren S", "Beechem J", "Mason C", "Schwartz R" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "I", "topic": "COVID-19", "url": "https://www.cemmeydan.com/publications/#p-borczuk20" }, { "key": "amundarain20", "year": 2020, "type": "abstract", "title": "Clinical relevance of lncRNAs involved in fusion transcripts expressed in multiple myeloma", "venue": "Haematologica", "doi": null, "authors": [ "Amundarain A", "Valcarcel L", "Ordonez R", "Garate L", "Miranda E", "Cendoya X", "Carrasco-Leon A", "Calasanz M", "Paiva B", "Meydan C", "Mason C", "Melnick A", "Rodriguez-Otero P", "Miguel J", "Planes F", "Prosper F", "Agirre X" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Myeloma", "url": "https://www.cemmeydan.com/publications/#p-amundarain20" }, { "key": "malkani20abs", "year": 2020, "type": "abstract", "title": "Circulating miRNA Spaceflight Signature Reveals Targets to Mitigate Associated Health Risks", "venue": "Human Research Program Investigators Workshop", "doi": null, "authors": [ "Malkani S", "Chin C", "Cekanaviciute E", "Mortreux M", "Okinula H", "Tarbier M", "Schreurs AS", "Shirazi-fard Y", "Tahimic C", "Rodriguez D", "Sexton B", "Butler D", "Verma A", "Bezdan D", "Durmaz C", "MacKay M", "Melnick A", "Meydan C", "Li S", "Garrett-Bakelman F", "Fromm B", "Langhorst B", "Dimalanta E", "Cheng-Campbell M", "Blaber E", "Vanderburg C", "Friedländer M", "McDonald J", "Costes S", "Rutkove S", "Grabham P", "Mason C", "Beheshti A" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "S", "topic": null, "url": "https://www.cemmeydan.com/publications/#p-malkani20abs" }, { "key": "beguelin20", "year": 2020, "type": "article", "title": "Mutant EZH2 Induces a Pre-malignant Lymphoma Niche by Reprogramming the Immune Response", "venue": "Cancer Cell", "doi": "10.1016/j.ccell.2020.04.004", "authors": [ "Béguelin W", "Teater M", "Meydan C", "Hoehn KB", "Phillip JM", "Soshnev AA", "Venturutti L", "Rivas MA", "Calvo-Fernández MT", "Gutierrez J", "Camarillo JM", "Takata K", "Tarte K", "Kelleher NL", "Steidl C", "Mason CE", "Elemento O", "Allis CD", "Kleinstein SH", "Melnick AM" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Lymphoma", "url": "https://www.cemmeydan.com/publications/#p-beguelin20" }, { "key": "meydan20", "year": 2020, "type": "article", "title": "Improved gastrointestinal health for irritable bowel syndrome with metagenome-guided interventions", "venue": "Precision Clinical Medicine", "doi": "10.1093/pcmedi/pbaa013", "authors": [ "Meydan C", "Afshinnekoo E", "Rickard N", "Daniels G", "Kunces L", "Hardy T", "Lili L", "Pesce S", "Jacobson P", "Mason CE", "Dudley J", "Zhang B" ], "consortium": null, "meydanRoles": [ "first author" ], "sharedRoles": [ "first author" ], "researchArea": "M", "topic": "Gut microbiome", "url": "https://www.cemmeydan.com/publications/#p-meydan20" }, { "key": "schmidt20", "year": 2020, "type": "article", "title": "The Effect of One Year in Space on Long-Chain Fatty Acid Desaturases and Elongases", "venue": "Lifestyle Genomics", "doi": "10.1159/000506769", "authors": [ "Schmidt MA", "Meydan C", "Schmidt CM", "Afshinnekoo E", "Mason CE" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "S", "topic": "Twins Study", "url": "https://www.cemmeydan.com/publications/#p-schmidt20" }, { "key": "beguelin19", "year": 2019, "type": "abstract", "title": "Ezh2 gain-of-function mutations generate a lymphoma-permissive immune niche", "venue": "Blood", "doi": "10.1182/blood-2019-132263", "authors": [ "Béguelin W", "Teater MR", "Meydan C", "Phillip JM", "Melnick A" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Lymphoma", "url": "https://www.cemmeydan.com/publications/#p-beguelin19" }, { "key": "carrasco19a", "year": 2019, "type": "abstract", "title": "Characterization of Complete Lncrnas Transcriptome Reveals Expression of Lncrnas As a Prognostic Factor and Linc-Smilo As a Potential Therapeutic Target in Multiple Myeloma", "venue": "Blood", "doi": "10.1182/blood-2019-123008", "authors": [ "Carrasco A", "Ezponda T", "Meydan C", "Valcárcel LV", "Ordoñez R", "Kulis M", "Garate L", "Miranda E", "Segura V", "Guruceaga E", "Vilas-Zornoza A", "Alignani D", "Castro L", "Pascual M", "Amundarain A", "El Omri H", "Yasin R", "Calasanz MJ", "Planes FJ", "Paiva B", "Mason C", "San-Miguel J", "Subero IM", "Melnick AM", "Prosper F", "Agirre X" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Myeloma", "url": "https://www.cemmeydan.com/publications/#p-carrasco19a" }, { "key": "valcarcel19", "year": 2019, "type": "abstract", "title": "Computational Systems Biology Models for the Identification of Metabolic Vulnerabilities in Multiple Myeloma", "venue": "Blood", "doi": "10.1182/blood-2019-123970", "authors": [ "Valcárcel LVV", "Ordoñez R", "Apaolaza I", "Valcárcel A", "Garate L", "Meydan C", "Paiva B", "Melnick AM", "San-Miguel J", "Planes FJ", "Agirre X", "Prosper F" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Myeloma", "url": "https://www.cemmeydan.com/publications/#p-valcarcel19" }, { "key": "carrasco19c", "year": 2019, "type": "abstract", "title": "Role of lncRNAs as prognostic factor and potential therapeutic target in Multiple Myeloma", "venue": "Clinical Lymphoma, Myeloma & Leukemia", "doi": "10.1016/j.clml.2019.09.585", "authors": [ "Carrasco-Leon A", "Ezponda T", "Meydan C", "Valcárcel LV", "Ordoñez R", "Kulis M", "Garate L", "Miranda E", "Segura V", "Guruceaga E", "Vilas-Zornoza A", "Alignani D", "Castro-Labrador L", "Pascual M", "Amundarain A", "El Omri H", "Taba RY", "Calasanz MJ", "Planes F", "Paiva B", "Mason CE", "San-Miguel J", "Martín-Subero JI", "Melnick A", "Agirre X", "Prosper F" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Myeloma", "url": "https://www.cemmeydan.com/publications/#p-carrasco19c" }, { "key": "duy19", "year": 2019, "type": "article", "title": "Rational targeting of cooperating layers of the epigenome yields enhanced therapeutic efficacy against AML", "venue": "Cancer Discovery", "doi": "10.1158/2159-8290.CD-19-0106", "authors": [ "Duy C", "Teater M", "Garrett-Bakelman FE", "Lee TC", "Meydan C", "Glass JL", "Li M", "Hellmuth JC", "Mohammad HP", "Smitheman KN", "Shih AH", "Abdel-Wahab O", "Tallman MS", "Guzman ML", "Muench D", "Grimes HL", "Roboz GJ", "Kruger RG", "Creasy CL", "Paietta EM", "Levine RL", "Carroll M", "Melnick AM" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Leukemia", "url": "https://www.cemmeydan.com/publications/#p-duy19" }, { "key": "hatzi19", "year": 2019, "type": "article", "title": "Histone demethylase LSD1 is required for germinal center formation and BCL6-driven lymphomagenesis", "venue": "Nature Immunology", "doi": "10.1038/s41590-018-0273-1", "authors": [ "Hatzi K", "Geng H", "Doane AS", "Meydan C", "LaRiviere R", "Cardenas M", "Duy C", "Shen H", "Vidal MNC", "Baslan T", "Mohammad HP", "Kruger RG", "Shaknovich R", "Haberman AM", "Inghirami G", "Lowe SW", "Melnick AM" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Lymphoma", "url": "https://www.cemmeydan.com/publications/#p-hatzi19" }, { "key": "carrasco19b", "year": 2019, "type": "abstract", "title": "Analysis of the complexity and heterogeneity of the lncRNAs transcriptome and its relevance in multiple myeloma", "venue": "Haematologica", "doi": null, "authors": [ "Carrasco-Leon A", "Ezponda T", "Meydan C", "Valcarcel L", "Ordonez R", "Kulis M", "Garate L", "Miranda E", "Segura V", "Guruceaga E", "Vilas-Zornoza A", "Alignani D", "Castro-Labrador L", "Pascual M", "Paiva B", "Miguel J", "Martin-Subero J", "Melnick A", "Prosper F", "Agirre X" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Myeloma", "url": "https://www.cemmeydan.com/publications/#p-carrasco19b" }, { "key": "carrasco19d", "year": 2019, "type": "abstract", "title": "PF583 Comprehensive analysis of the complexity and heterogeneity of the lncRNAs transcriptome in multiple myeloma", "venue": "HemaSphere", "doi": "10.1097/01.hs9.0000560620.31894.f0", "authors": [ "Carrasco‐Leon A", "Ezponda T", "Meydan C", "Valcárcel LV", "Ordoñez R", "Kulis M", "Garate L", "Miranda E", "Segura V", "Guruceaga E", "Vilas‐Zornoza A", "Alignani D", "Castro‐Labrador L", "Pascual M", "Amundarain A", "El‐Omri H", "Taha RY", "Calasanz MJ", "Planes FJ", "Mason C", "Miguel JS", "Subero JIM", "Melnick A", "Prosper F", "Agirre X" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Myeloma", "url": "https://www.cemmeydan.com/publications/#p-carrasco19d" }, { "key": "ordonez19", "year": 2019, "type": "abstract", "title": "PF567 Chromatin activation as a unifying principle underlying pathogenic mechanisms in multiple myeloma", "venue": "HemaSphere", "doi": "10.1097/01.hs9.0000560560.72691.d3", "authors": [ "Ordoñez R", "Kulis M", "Russiñol N", "Chapaprieta V", "Beekman R", "Meydan C", "Duran‐Ferrer M", "Verdaguer‐Dot N", "Clot G", "Vilarrasa‐Blasi R", "Garate L", "Miranda E", "Carrasco A", "Ezponda T", "Martens JHA", "El‐Omri H", "Taha RY", "Calasanz MJ", "Paiva B", "Miguel JS", "Flicek P", "Gut I", "Melnick A", "Mitsiades CS", "Licht JD", "Campo E", "Stunnenberg HG", "Agirre X", "Martin‐Subero JI", "Prósper F" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Myeloma", "url": "https://www.cemmeydan.com/publications/#p-ordonez19" }, { "key": "topcuoglu19", "year": 2019, "type": "article", "title": "Growth Kinetics, Carbon Isotope Fractionation, and Gene Expression in the Hyperthermophile Methanocaldococcus jannaschii during Hydrogen-Limited Growth and Interspecies Hydrogen Transfer", "venue": "Applied and Environmental Microbiology", "doi": "10.1128/AEM.00180-19", "authors": [ "Topçuoğlu BD", "Meydan C", "Nguyen TB", "Lang SQ", "Holden JF" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "M", "topic": "Archaea", "url": "https://www.cemmeydan.com/publications/#p-topcuoglu19" }, { "key": "twins19", "year": 2019, "type": "article", "title": "The NASA Twins Study: A multidimensional analysis of a year-long human spaceflight", "venue": "Science", "doi": "10.1126/science.aau8650", "authors": [ "Garrett-Bakelman FE", "Darshi M", "Green SJ", "Gur RC", "Lin L", "Macias BR", "McKenna MJ", "Meydan C", "Mishra T", "Nasrini J", "Piening BD", "Rizzardi LF", "Sharma K", "Siamwala JH", "Taylor L", "Vitaterna MH", "Afkarian M", "Afshinnekoo E", "Ahadi S", "Ambati A", "Arya M", "Bezdan D", "Callahan CM", "Chen S", "Choi AMK", "Chlipala GE", "Contrepois K", "Covington M", "Crucian BE", "De Vivo I", "Dinges DF", "Ebert DJ", "Feinberg JI", "Gandara JA", "George KA", "Goutsias J", "Grills GS", "Hargens AR", "Heer M", "Hillary RP", "Hoofnagle AN", "Hook VYH", "Jenkinson G", "Jiang P", "Keshavarzian A", "Laurie SS", "Lee-McMullen B", "Lumpkins SB", "MacKay M", "Maienschein-Cline MG", "Melnick AM", "Moore TM", "Nakahira K", "Patel HH", "Pietrzyk R", "Rao V", "Saito R", "Salins DN", "Schilling JM", "Sears DD", "Sheridan CK", "Stenger MB", "Tryggvadottir R", "Urban AE", "Vaisar T", "Van Espen B", "Zhang J", "Ziegler MG", "Zwart SR", "Charles JB", "Kundrot CE", "Scott GBI", "Bailey SM", "Basner M", "Feinberg AP", "Lee SMC", "Mason CE", "Mignot E", "Rana BK", "Smith SM", "Snyder MP", "Turek FW" ], "consortium": null, "meydanRoles": [ "first author" ], "sharedRoles": [ "first author" ], "researchArea": "S", "topic": "Twins Study", "url": "https://www.cemmeydan.com/publications/#p-twins19" }, { "key": "agirre19", "year": 2019, "type": "article", "title": "Long non-coding RNAs discriminate the stages and gene regulatory states of human humoral immune response", "venue": "Nature Communications", "doi": "10.1038/s41467-019-08679-z", "authors": [ "Agirre X", "Meydan C", "Jiang Y", "Garate L", "Doane AS", "Li Z", "Verma A", "Paiva B", "Martín-Subero JI", "Elemento O", "Mason CE", "Prosper F", "Melnick A" ], "consortium": null, "meydanRoles": [ "first author" ], "sharedRoles": [ "first author" ], "researchArea": "I", "topic": "B cell", "url": "https://www.cemmeydan.com/publications/#p-agirre19" }, { "key": "barreyro18", "year": 2018, "type": "abstract", "title": "Therapeutic Targeting of the Ubiquitin Conjugating Enzyme UBE2N in Myeloid Malignancies", "venue": "Blood", "doi": "10.1182/blood-2018-99-115359", "authors": [ "Barreyro L", "Sampson A", "Hueneman K", "Bolanos LC", "Pujato M", "Chutipongtanate S", "Wyder M", "Haffey W", "Choi K", "Neelamraju Y", "Smith MA", "Niederkorn M", "Ramesh V", "Muto T", "O'Brien E", "Meydan C", "Christie S", "Liu X", "Garret-Bakelman F", "Bartholdy B", "Will B", "Weirauch MT", "Gul Z", "Medlin S", "Perentesis JP", "Greis KD", "Seibel W", "Starczynowski DT" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Leukemia", "url": "https://www.cemmeydan.com/publications/#p-barreyro18" }, { "key": "topcuoglu18", "year": 2018, "type": "article", "title": "Formate hydrogenlyase and formate secretion ameliorate H2 inhibition in the hyperthermophilic archaeon Thermococcus paralvinellae", "venue": "Environmental Microbiology", "doi": "10.1111/1462-2920.14022", "authors": [ "Topçuoğlu BD", "Meydan C", "Orellana R", "Holden JF" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "M", "topic": "Archaea", "url": "https://www.cemmeydan.com/publications/#p-topcuoglu18" }, { "key": "topcuoglu18abs", "year": 2018, "type": "abstract", "title": "Growth Kinetics and Gene Expression in a Hyperthermophilic Methanogen during H2-limited and Syntrophic Growth", "venue": "Goldschmidt Conference", "doi": null, "authors": [ "Topcuoglu B", "Meydan C", "Holden J" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "X", "topic": "Microbiology", "url": "https://www.cemmeydan.com/publications/#p-topcuoglu18abs" }, { "key": "jain18", "year": 2018, "type": "article", "title": "ketu mutant mice uncover an essential meiotic function for the ancient RNA helicase YTHDC2", "venue": "eLife", "doi": "10.7554/eLife.30919", "authors": [ "Jain D", "Puno MR", "Meydan C", "Lailler N", "Mason CE", "Lima CD", "Anderson KV", "Keeney S" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "X", "topic": "Meiosis", "url": "https://www.cemmeydan.com/publications/#p-jain18" }, { "key": "kunimoto18", "year": 2018, "type": "article", "title": "Cooperative epigenetic remodeling by TET2 loss and NRAS mutation drives myeloid transformation and MEK inhibitor sensitivity", "venue": "Cancer Cell", "doi": "10.1016/j.ccell.2017.11.012", "authors": [ "Kunimoto H", "Meydan C", "Nazir A", "Whitfield J", "Shank K", "Rapaport F", "Maher R", "Pronier E", "Meyer SC", "Garrett-Bakelman FE", "Tallman M", "Melnick A", "Levine RL", "Shih AH" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Leukemia", "url": "https://www.cemmeydan.com/publications/#p-kunimoto18" }, { "key": "fachel17", "year": 2017, "type": "abstract", "title": "SOX9 enhancer regulator may play an oncogenic role in B-cell lymphomas", "venue": "Clinical Cancer Research", "doi": "10.1158/1557-3265.hemmal17-30", "authors": [ "Fachel AA", "Jiang Y", "Tam W", "Muley AS", "Meydan C", "Agirre X", "Melnick AM", "Richards KL" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Lymphoma", "url": "https://www.cemmeydan.com/publications/#p-fachel17" }, { "key": "jain17", "year": 2017, "type": "article", "title": "rahu is a mutant allele of Dnmt3c, encoding a DNA methyltransferase homolog required for meiosis and transposon repression in the mouse male germline", "venue": "PLoS Genetics", "doi": "10.1371/journal.pgen.1006964", "authors": [ "Jain D", "Meydan C", "Lange J", "Claeys Bouuaert C", "Lailler N", "Mason CE", "Anderson KV", "Keeney S" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "X", "topic": "Meiosis", "url": "https://www.cemmeydan.com/publications/#p-jain17" }, { "key": "glass17", "year": 2017, "type": "article", "title": "Epigenetic identity in AML depends on disruption of nonpromoter regulatory elements and is affected by antagonistic effects of mutations in epigenetic modifiers", "venue": "Cancer Discovery", "doi": "10.1158/2159-8290.CD-16-1032", "authors": [ "Glass JL", "Hassane D", "Wouters BJ", "Kunimoto H", "Avellino R", "Garrett-Bakelman FE", "Guryanova OA", "Bowman R", "Redlich S", "Intlekofer AM", "Meydan C", "Qin T", "Fall M", "Alonso A", "Guzman ML", "Valk PJM", "Thompson CB", "Levine R", "Elemento O", "Delwel R", "Melnick A", "Figueroa ME" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Leukemia", "url": "https://www.cemmeydan.com/publications/#p-glass17" }, { "key": "li17abs", "year": 2017, "type": "abstract", "title": "Genetically-defined AML subgroups represent diverse epigenetic heterogeneity landscape", "venue": "Blood", "doi": null, "authors": [ "Li S", "Chen X", "Wang J", "Meydan C", "Glass J", "Shih A", "Valk P", "Delwel R", "Levine R", "Mason C", "Melnick A" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Leukemia", "url": "https://www.cemmeydan.com/publications/#p-li17abs" }, { "key": "carrasco17a", "year": 2017, "type": "abstract", "title": "Heterogeneity of the expression of long non-coding RNAs and their functional implication in multiple myeloma", "venue": "Haematologica", "doi": null, "authors": [ "Carrasco A", "Ezponda T", "Meydan C", "Kulis M", "Ordonez R", "Segura V", "Garate L", "Alignani D", "Paiva B", "Miguel J", "Subero J", "Melnick A", "Agirre X", "Prosper F" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Myeloma", "url": "https://www.cemmeydan.com/publications/#p-carrasco17a" }, { "key": "ordonez17a", "year": 2017, "type": "abstract", "title": "Definition of the reference epigenoma and identification of new epi-oncogenes in multiple myeloma", "venue": "Haematologica", "doi": null, "authors": [ "Ordonez R", "Kulis M", "Russinol N", "Beekman R", "Meydan C", "Dot N", "Carrasco A", "Ezponda T", "Martens J", "Stunnenberg H", "Paiva B", "Miguel J", "Melnick A", "Campo E", "Agirre X", "Subero J", "Prosper F" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Myeloma", "url": "https://www.cemmeydan.com/publications/#p-ordonez17a" }, { "key": "carrasco17b", "year": 2017, "type": "abstract", "title": "Long non-coding RNAs expression heterogeneity and functional involvement in multiple myeloma", "venue": "Haematologica", "doi": null, "authors": [ "Carrasco A", "Ezponda T", "Meydan C", "Kulis M", "Ordonez R", "Segura V", "Garate L", "Alignani D", "Paiva B", "Miguel J", "Martin-Subero J", "Melnick A", "Prosper F", "Agirre X" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Myeloma", "url": "https://www.cemmeydan.com/publications/#p-carrasco17b" }, { "key": "ordonez17b", "year": 2017, "type": "abstract", "title": "Multilayer epigenomic analyses reveal of new candidate oncogenes involved in the pathogenesis of multiple myeloma", "venue": "Haematologica", "doi": null, "authors": [ "Ordonez R", "Kulis M", "Russinol N", "Beekman R", "Meydan C", "Verdaguer-Dot N", "Carrasco A", "Ezponda T", "Martens J", "Stunnenberg H", "Paiva B", "Miguel J", "Melnick A", "Campo E", "Prosper F", "Agirre X", "Martin-Subero J" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Myeloma", "url": "https://www.cemmeydan.com/publications/#p-ordonez17b" }, { "key": "shih17", "year": 2017, "type": "article", "title": "Combination targeted therapy to disrupt aberrant oncogenic signaling and reverse epigenetic dysfunction in IDH2- and TET2-mutant acute myeloid leukemia", "venue": "Cancer Discovery", "doi": "10.1158/2159-8290.CD-16-1049", "authors": [ "Shih AH", "Meydan C", "Shank K", "Garrett-Bakelman FE", "Ward PS", "Intlekofer AM", "Nazir A", "Stein EM", "Knapp K", "Glass J", "Travins J", "Straley K", "Gliser C", "Mason CE", "Yen K", "Thompson CB", "Melnick A", "Levine RL" ], "consortium": null, "meydanRoles": [ "first author" ], "sharedRoles": [ "first author" ], "researchArea": "C", "topic": "Leukemia", "url": "https://www.cemmeydan.com/publications/#p-shih17" }, { "key": "vu17", "year": 2017, "type": "article", "title": "Functional screen of MSI2 interactors identifies an essential role for SYNCRIP in myeloid leukemia stem cells", "venue": "Nature Genetics", "doi": "10.1038/ng.3854", "authors": [ "Vu LP", "Prieto C", "Amin EM", "Chhangawala S", "Krivtsov A", "Calvo-Vidal MN", "Chou T", "Chow A", "Minuesa G", "Park SM", "Barlowe TS", "Taggart J", "Tivnan P", "Deering RP", "Chu LP", "Kwon JA", "Meydan C", "Perales-Paton J", "Arshi A", "Gönen M", "Famulare C", "Patel M", "Paietta E", "Tallman MS", "Lu Y", "Glass J", "Garret-Bakelman FE", "Melnick A", "Levine R", "Al-Shahrour F", "Järås M", "Hacohen N", "Hwang A", "Garippa R", "Lengner CJ", "Armstrong SA", "Cerchietti L", "Cowley GS", "Root D", "Doench J", "Leslie C", "Ebert BL", "Kharas MG" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Leukemia", "url": "https://www.cemmeydan.com/publications/#p-vu17" }, { "key": "kunimoto17", "year": 2017, "type": "article", "title": "Aid is a key regulator of myeloid/erythroid differentiation and DNA methylation in hematopoietic stem/progenitor cells", "venue": "Blood", "doi": "10.1182/blood-2016-06-721977", "authors": [ "Kunimoto H", "McKenney AS", "Meydan C", "Shank K", "Nazir A", "Rapaport F", "Durham B", "Garrett-Bakelman FE", "Pronier E", "Shih AH", "Melnick A", "Chaudhuri J", "Levine RL" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Leukemia", "url": "https://www.cemmeydan.com/publications/#p-kunimoto17" }, { "key": "jiang17", "year": 2017, "type": "article", "title": "CREBBP inactivation promotes the development of HDAC3-dependent lymphomas", "venue": "Cancer Discovery", "doi": "10.1158/2159-8290.CD-16-0975", "authors": [ "Jiang Y", "Ortega-Molina A", "Geng H", "Ying HY", "Hatzi K", "Parsa S", "McNally D", "Wang L", "Doane AS", "Agirre X", "Teater M", "Meydan C", "Li Z", "Poloway D", "Wang S", "Ennishi D", "Scott DW", "Stengel KR", "Kranz JE", "Holson E", "Sharma S", "Young JW", "Chu CS", "Roeder RG", "Shaknovich R", "Hiebert SW", "Gascoyne RD", "Tam W", "Elemento O", "Wendel HG", "Melnick AM" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Lymphoma", "url": "https://www.cemmeydan.com/publications/#p-jiang17" }, { "key": "fachel16", "year": 2016, "type": "abstract", "title": "Targeting Beta-Catenin Signaling in DLBCL with ICG-001 and PAM-1 Suppresses Cell Proliferation and Induces Apoptosis", "venue": "Blood", "doi": "10.1182/blood.v128.22.5382.5382", "authors": [ "Fachel AA", "Muley AS", "Meydan C", "Agirre X", "Cerchietti L", "Melnick A", "Richards KL" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Lymphoma", "url": "https://www.cemmeydan.com/publications/#p-fachel16" }, { "key": "carrasco16", "year": 2016, "type": "abstract", "title": "Long Non-Coding RNAs Annotation and Their Involvement in Multiple Myeloma", "venue": "Blood", "doi": "10.1182/blood.v128.22.4420.4420", "authors": [ "Carrasco A", "Ezponda T", "Meydan C", "Kulis M", "Ordoñez R", "Garate L", "Segura V", "Alignani D", "Paiva B", "San Miguel J", "Martin Subero JI", "Melnick A", "Prosper F", "Agirre X" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Myeloma", "url": "https://www.cemmeydan.com/publications/#p-carrasco16" }, { "key": "duy16", "year": 2016, "type": "abstract", "title": "Cooperative Gene Repression By DNA Methylation and LSD1-Mediated Enhancer Inactivation in Acute Myeloid Leukemia", "venue": "Blood", "doi": "10.1182/blood.v128.22.1048.1048", "authors": [ "Duy C", "Teater M", "Garrett-Bakelman FE", "Lee TC", "Meydan C", "Glass JL", "Li M", "Mohammad H", "Smitheman K", "Shih AH", "Abdel-Wahab O", "Paietta E", "Tallman MS", "Guzman ML", "Kruger RG", "Creasy CL", "Levine RL", "Carroll M", "Melnick A" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Leukemia", "url": "https://www.cemmeydan.com/publications/#p-duy16" }, { "key": "metasub16", "year": 2016, "type": "article", "title": "The metagenomics and metadesign of the subways and urban biomes (MetaSUB) international consortium inaugural meeting report", "venue": "Microbiome", "doi": "10.1186/s40168-016-0168-z", "authors": [ "The MetaSUB International Consortium" ], "consortium": "including Meydan C", "meydanRoles": [], "sharedRoles": [], "researchArea": "M", "topic": "MetaSUB", "url": "https://www.cemmeydan.com/publications/#p-metasub16" }, { "key": "viny15abs", "year": 2015, "type": "abstract", "title": "Dose-Dependent Role of the Cohesin Complex in Normal and Malignant Hematopoiesis", "venue": "Blood", "doi": "10.1182/blood.v126.23.435.435", "authors": [ "Viny AD", "Ott CJ", "Spitzer B", "Rivas MA", "Meydan C", "Papalexi E", "Yelin D", "Shank K", "Reyes J", "Chiu A", "Thota S", "Maciejewski JP", "Melnick A", "Bradner JE", "Levine RL" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Leukemia", "url": "https://www.cemmeydan.com/publications/#p-viny15abs" }, { "key": "viny15", "year": 2015, "type": "article", "title": "Dose-dependent role of the cohesin complex in normal and malignant hematopoiesis", "venue": "Journal of Experimental Medicine", "doi": "10.1084/jem.20151317", "authors": [ "Viny AD", "Ott CJ", "Spitzer B", "Rivas M", "Meydan C", "Papalexi E", "Yelin D", "Shank K", "Reyes J", "Chiu A", "Romin Y", "Boyko V", "Thota S", "Maciejewski JP", "Melnick A", "Bradner JE", "Levine RL" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Leukemia", "url": "https://www.cemmeydan.com/publications/#p-viny15" }, { "key": "afshin15b", "year": 2015, "type": "article", "title": "Modern Methods for Delineating Metagenomic Complexity", "venue": "Cell Systems", "doi": "10.1016/j.cels.2015.07.007", "authors": [ "Afshinnekoo E", "Meydan C", "Chowdhury S", "Jaroudi D", "Boyer C", "Bernstein N", "Maritz JM", "Reeves D", "Gandara J", "Chhangawala S", "Ahsanuddin S", "Simmons A", "Nessel T", "Sundaresh B", "Pereira E", "Jorgensen E", "Kolokotronis SO", "Kirchberger N", "Garcia I", "Gandara D", "Dhanraj S", "Nawrin T", "Saletore Y", "Alexander N", "Vijay P", "Hénaff EM", "Zumbo P", "Walsh M", "O’Mullan GD", "Tighe S", "Dudley JT", "Dunaif A", "Ennis S", "O’Halloran E", "Magalhaes TR", "Boone B", "Jones AL", "Muth TR", "Paolantonio KS", "Alter E", "Schadt EE", "Garbarino J", "Prill RJ", "Carlton JM", "Levy S", "Mason CE" ], "consortium": null, "meydanRoles": [ "first author" ], "sharedRoles": [ "first author" ], "researchArea": "M", "topic": "PathoMap", "url": "https://www.cemmeydan.com/publications/#p-afshin15b" }, { "key": "afshin15a", "year": 2015, "type": "article", "title": "Geospatial Resolution of Human and Bacterial Diversity with City-Scale Metagenomics", "venue": "Cell Systems", "doi": "10.1016/j.cels.2015.01.001", "authors": [ "Afshinnekoo E", "Meydan C", "Chowdhury S", "Jaroudi D", "Boyer C", "Bernstein N", "Maritz JM", "Reeves D", "Gandara J", "Chhangawala S", "Ahsanuddin S", "Simmons A", "Nessel T", "Sundaresh B", "Pereira E", "Jorgensen E", "Kolokotronis SO", "Kirchberger N", "Garcia I", "Gandara D", "Dhanraj S", "Nawrin T", "Saletore Y", "Alexander N", "Vijay P", "Hénaff EM", "Zumbo P", "Walsh M", "O’Mullan GD", "Tighe S", "Dudley JT", "Dunaif A", "Ennis S", "O’Halloran E", "Magalhaes TR", "Boone B", "Jones AL", "Muth TR", "Paolantonio KS", "Alter E", "Schadt EE", "Garbarino J", "Prill RJ", "Carlton JM", "Levy S", "Mason CE" ], "consortium": null, "meydanRoles": [ "first author" ], "sharedRoles": [ "first author" ], "researchArea": "M", "topic": "PathoMap", "url": "https://www.cemmeydan.com/publications/#p-afshin15a" }, { "key": "linder15", "year": 2015, "type": "article", "title": "Single-nucleotide-resolution mapping of m6A and m6Am throughout the transcriptome", "venue": "Nature Methods", "doi": "10.1038/nmeth.3453", "authors": [ "Linder B", "Grozhik AV", "Olarerin-George AO", "Meydan C", "Mason CE", "Jaffrey SR" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "X", "topic": "RNA modification", "url": "https://www.cemmeydan.com/publications/#p-linder15" }, { "key": "shih15abs", "year": 2015, "type": "abstract", "title": "Significance of Novel Gene Mutations in AML", "venue": "Annals of Hematology", "doi": null, "authors": [ "Shih A", "Jiang Y", "Meydan C", "Melnick A", "Levine R" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Leukemia", "url": "https://www.cemmeydan.com/publications/#p-shih15abs" }, { "key": "busby15pre", "year": 2015, "type": "preprint", "title": "Building genomic analysis pipelines in a hackathon setting with bioinformatician teams: DNA-seq, epigenomics, metagenomics and RNA-seq", "venue": "bioRxiv", "doi": "10.1101/018085", "authors": [ "Busby B", "Dillman A", "Simpson CL", "Fingerman I", "Yun S", "Kristensen DM", "Federer L", "Shah N", "LaFave MC", "Jimenez-Barron L", "Pande M", "Luo W", "Miller B", "Mayden C", "Chandramohan D", "Fletez-Brant K", "Bible PW", "Nowoshilow S", "Chan A", "Galvez EJ", "Chignell J", "Paulson JN", "Kandpal M", "Yoon S", "Asaki E", "Nellore A", "Stine A", "Sanders R", "Becker J", "Lesko M", "Abzug M", "Yaschenko E" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "X", "topic": null, "url": "https://www.cemmeydan.com/publications/#p-busby15pre" }, { "key": "shih15", "year": 2015, "type": "article", "title": "Mutational Cooperativity Linked to Combinatorial Epigenetic Gain of Function in Acute Myeloid Leukemia", "venue": "Cancer Cell", "doi": "10.1016/j.ccell.2015.03.009", "authors": [ "Shih AH", "Jiang Y", "Meydan C", "Shank K", "Pandey S", "Barreyro L", "Antony-Debre I", "Viale A", "Socci N", "Sun Y", "Robertson A", "Cavatore M", "de Stanchina E", "Hricik T", "Rapaport F", "Woods B", "Wei C", "Hatlen M", "Baljevic M", "Nimer SD", "Tallman M", "Paietta E", "Cimmino L", "Aifantis I", "Steidl U", "Mason C", "Melnick A", "Levine RL" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Leukemia", "url": "https://www.cemmeydan.com/publications/#p-shih15" }, { "key": "dubchak14", "year": 2014, "type": "article", "title": "An integrative computational approach for prioritization of genomic variants", "venue": "PLoS One", "doi": "10.1371/journal.pone.0114903", "authors": [ "Dubchak I", "Balasubramanian S", "Wang S", "Meydan C", "Sulakhe D", "Poliakov A", "Börnigen D", "Xie B", "Taylor A", "Ma J", "Paciorkowski AR", "Mirzaa GM", "Dave P", "Agam G", "Xu J", "Al-Gazali L", "Mason CE", "Ross ME", "Maltsev N", "Gilliam TC" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "X", "topic": null, "url": "https://www.cemmeydan.com/publications/#p-dubchak14" }, { "key": "shih14", "year": 2014, "type": "abstract", "title": "AG-221, a Small Molecule Mutant IDH2 Inhibitor, Remodels the Epigenetic State of IDH2-Mutant Cells and Induces Alterations in Self-Renewal/Differentiation in IDH2-Mutant AML", "venue": "Blood", "doi": "10.1182/blood.v124.21.437.437", "authors": [ "Shih AH", "Shank KR", "Meydan C", "Intlekofer AM", "Ward P", "Thompson CB", "Melnick AM", "Travins J", "Straley K", "Gliser C", "Yen K", "Levine RL" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "C", "topic": "Leukemia", "url": "https://www.cemmeydan.com/publications/#p-shih14" }, { "key": "yilancioglu14", "year": 2014, "type": "article", "title": "Target-independent prediction of drug synergies using only drug lipophilicity", "venue": "Journal of Chemical Information and Modeling", "doi": "10.1021/ci500276x", "authors": [ "Yilancioglu K", "Weinstein ZB", "Meydan C", "Akhmetov A", "Toprak I", "Durmaz A", "Iossifov I", "Kazan H", "Roth FP", "Cokol M" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "X", "topic": null, "url": "https://www.cemmeydan.com/publications/#p-yilancioglu14" }, { "key": "bakis13", "year": 2013, "type": "article", "title": "Constructing robust phylogenetic trees for Galanthus L. using the relative complexity measure", "venue": "BMC Bioinformatics", "doi": "10.1186/1471-2105-14-20", "authors": [ "Bakış Y", "Otu HH", "Taşçı N", "Meydan C", "Bilgin N", "Yüzbaşıoğlu S", "Sezerman OU" ], "consortium": null, "meydanRoles": [], "sharedRoles": [], "researchArea": "X", "topic": null, "url": "https://www.cemmeydan.com/publications/#p-bakis13" }, { "key": "meydan13", "year": 2013, "type": "article", "title": "Prediction of peptides binding to MHC class I and II alleles by temporal motif mining", "venue": "BMC Bioinformatics", "doi": 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"https://www.cemmeydan.com/publications/#p-meydan09a" }, { "key": "meydan08", "year": 2008, "type": "abstract", "title": "Discovery of biomarkers for hexachlorobenzene toxicity using population based methods on gene expression data", "venue": "Pattern Recognition in Bioinformatics (PRIB)", "doi": "10.1007/978-3-540-88436-1_35", "authors": [ "Meydan C", "Küçükural A", "Yörükoğlu D", "Sezerman OU" ], "consortium": null, "meydanRoles": [ "first author" ], "sharedRoles": [], "researchArea": "X", "topic": null, "url": "https://www.cemmeydan.com/publications/#p-meydan08" } ] }